RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PIGSQ96S52 555 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 ACAD9Q9H845 621 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 PARPBPQ9NWS1 579 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 RAB21Q9UL25 225 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 ADGRA2Q96PE1 1338 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 LMTK3Q96Q04 1460 aa6.87□□□□□ -1.31
SMC2-205ENST00000493955 A0A087X0M5 115 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 A0A1B0GX30 115 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 F5H0A9 414 aaPredicted RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 NXPH3O95157 252 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 RTN3O95197 1032 aaPredicted RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 CREB1P16220 341 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 TPTEP56180 551 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 RPL15P61313 204 aaKnown RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 CYP1B1Q16678 543 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 NRN1LQ496H8 165 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 PTGR2Q8N8N7 351 aaPredicted RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 NGDNQ8NEJ9 315 aaKnown RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 LINS1Q8NG48 757 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 SLC25A43Q8WUT9 341 aaPredicted RBP6.86□□□□□ -1.31
SMC2-205ENST00000493955 STAMQ92783 540 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 CTHRC1Q96CG8 243 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 PRR25Q96S07 402 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 KLC2Q9H0B6 622 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 KLC4Q9NSK0 619 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 EHD3Q9NZN3 535 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 CEP72Q9P209 647 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 ST6GALNAC2Q9UJ37 374 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 HSF4Q9ULV5 492 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 GABRQQ9UN88 632 aa6.86□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3DA0A087WVF3 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3IA0A087WXS9 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3EA0A087X179 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3KA0A087X1G2 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 CCDC187A0A096LP49 1063 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 DYTNA2CJ06 578 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3BA6NDS4 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3FA6NER0 549 aaPredicted RBP6.85□□□□□ -1.31
SMC2-205ENST00000493955 AGAP5A6NIR3 686 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3LB9A6J9 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 MUSKO15146 869 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 CSF1P09603 554 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3HP0C7X1 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 GRK5P34947 590 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 PGM1P36871 562 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 DCAF7P61962 342 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 GALNT2Q10471 571 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 GPR68Q15743 365 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 FAM187BQ17R55 369 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 LRRC24Q50LG9 513 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3GQ6DHY5 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3CQ6IPX1 549 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 C16orf89Q6UX73 402 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 LRRC8DQ7L1W4 858 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D3Q8IZP1 549 aaPredicted RBP6.85□□□□□ -1.31
SMC2-205ENST00000493955 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 LOXL4Q96JB6 756 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 ZNF703Q9H7S9 590 aaPredicted RBP6.85□□□□□ -1.31
SMC2-205ENST00000493955 RCE1Q9Y256 329 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 PCDHA10Q9Y5I2 948 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 CYP46A1Q9Y6A2 500 aa6.85□□□□□ -1.31
SMC2-205ENST00000493955 YY2O15391 372 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 CA12O43570 354 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TMPRSS11DO60235 418 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 ZNF37AP17032 561 aaPredicted RBP6.84□□□□□ -1.31
SMC2-205ENST00000493955 IGHMBP2P38935 993 aaKnown RBP6.84□□□□□ -1.31
SMC2-205ENST00000493955 PNPLA4P41247 253 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 PCP4P48539 62 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TXNL4AP83876 142 aaKnown RBP6.84□□□□□ -1.31
SMC2-205ENST00000493955 SLC25A3Q00325 362 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 E2F1Q01094 437 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TLE3Q04726 772 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 DEUP1Q05D60 604 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 DNASE1L3Q13609 305 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 BAK1Q16611 211 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TIGD2Q4W5G0 525 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 ACSM6Q6P461 480 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 SIRT6Q8N6T7 355 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 PNPLA1Q8N8W4 532 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TDRD7Q8NHU6 1098 aaKnown RBP6.84□□□□□ -1.31
SMC2-205ENST00000493955 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TBC1D22AQ8WUA7 517 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 PBKQ96KB5 322 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 KCTD5Q9NXV2 234 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 DKK3Q9UBP4 350 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 TESQ9UGI8 421 aaKnown RBP6.84□□□□□ -1.31
SMC2-205ENST00000493955 ASAP1Q9ULH1 1129 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 GDAQ9Y2T3 454 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 PCDHB2Q9Y5E7 798 aa6.84□□□□□ -1.31
SMC2-205ENST00000493955 A0A1W2PPH5 198 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 VWC2LB2RUY7 222 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 PEX12O00623 359 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 CYP3A4P08684 503 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 DLDP09622 509 aaKnown RBP6.84□□□□□ -1.32
SMC2-205ENST00000493955 CHN1P15882 459 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 ABCD3P28288 659 aa6.84□□□□□ -1.32
SMC2-205ENST00000493955 RCAN1P53805 252 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms