RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SIK3Q9Y2K2 1263 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 ANTXRLA6NF34 631 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 TRIM24O15164 1050 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 APBB3O95704 486 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 CYP11B1P15538 503 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 DGKGP49619 791 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 ZNF445P59923 1031 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 KLHL40Q2TBA0 621 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 C10orf76Q5T2E6 689 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 NUGGCQ68CJ6 796 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 C1orf131Q8NDD1 294 aaKnown RBP23.59■■□□□ 1.37
SNIP1-203ENST00000493916 SERPINB11Q96P15 392 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 POPDC2Q9HBU9 364 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 STARD13Q9Y3M8 1113 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 CEP83Q9Y592 693 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 ZNF292O60281 2723 aa23.59■■□□□ 1.37
SNIP1-203ENST00000493916 GFRA2O00451 464 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 CYBBP04839 570 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 CISD3P0C7P0 127 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 TIE1P35590 1138 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 KLK7P49862 253 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 SNX16P57768 344 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 YWHAZP63104 245 aaKnown RBP23.58■■□□□ 1.37
SNIP1-203ENST00000493916 APTXQ7Z2E3 356 aaKnown RBP23.58■■□□□ 1.37
SNIP1-203ENST00000493916 UNC45BQ8IWX7 931 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 ALLCQ8N6M5 410 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 BHMTQ93088 406 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 FAM207AQ9NSI2 230 aaPredicted RBP23.58■■□□□ 1.37
SNIP1-203ENST00000493916 ASNSD1Q9NWL6 643 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 PLK2Q9NYY3 685 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 TJP2Q9UDY2 1190 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 EBF1Q9UH73 591 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 NAALADL1Q9UQQ1 740 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 SLC27A6Q9Y2P4 619 aa23.58■■□□□ 1.37
SNIP1-203ENST00000493916 HRO43593 1189 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 KLF8O95600 359 aaPredicted RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 GLI1P08151 1106 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 CDK11BP21127 795 aaKnown RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 CDH5P33151 784 aaPredicted RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 TBX4P57082 545 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 ADGRF1Q5T601 910 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 EMC10Q5UCC4 262 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 TOGARAM2Q6ZUX3 1019 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 TRMT11Q7Z4G4 463 aaKnown RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 CCDC33Q8N5R6 958 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 TXNDC5Q8NBS9 432 aaKnown RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 DDX1Q92499 740 aaKnown RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 RUBCNQ92622 972 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 AZIN2Q96A70 460 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 IRX2Q9BZI1 471 aaPredicted RBP23.57■■□□□ 1.36
SNIP1-203ENST00000493916 TLR6Q9Y2C9 796 aa23.57■■□□□ 1.36
SNIP1-203ENST00000493916 CAPN9O14815 690 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 EPHB6O15197 1021 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 PXNP49023 591 aaPredicted RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SLC11A2P49281 568 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 DGKEP52429 567 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 JAM2P57087 298 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 POLR2FP61218 127 aaKnown RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SYCP1Q15431 976 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 CRY1Q16526 586 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 PTPN20Q4JDL3 420 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 MPPE1Q53F39 396 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 EOGTQ5NDL2 527 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SYPL2Q5VXT5 272 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 TAC4Q86UU9 113 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 DHX40Q8IX18 779 aaKnown RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 ZNF513Q8N8E2 541 aaPredicted RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 TMEM35BQ8NCS4 154 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 TSTD1Q8NFU3 115 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 EPS8L1Q8TE68 723 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SLC39A13Q96H72 371 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 PIWIL1Q96J94 861 aaKnown RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 FCRL2Q96LA5 508 aaPredicted RBP23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SLC2A13Q96QE2 648 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 FUCA2Q9BTY2 467 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 HCN2Q9UL51 889 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 CFAP54Q96N23 3096 aa23.56■■□□□ 1.36
SNIP1-203ENST00000493916 SGK1O00141 431 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 AXIN1O15169 862 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 HSF2BPO75031 334 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 ADAM23O75077 832 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 LSM8O95777 96 aaKnown RBP23.55■■□□□ 1.36
SNIP1-203ENST00000493916 IGLV3-25P01717 112 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 ERBB2P04626 1255 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 PTMSP20962 102 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 UBXN1Q04323 297 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 SRSF5Q13243 272 aaKnown RBP23.55■■□□□ 1.36
SNIP1-203ENST00000493916 SIM2Q14190 667 aaPredicted RBP23.55■■□□□ 1.36
SNIP1-203ENST00000493916 EFHC1Q5JVL4 640 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 OLFML1Q6UWY5 402 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 FAM183BPQ6ZVS7 135 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 NOP9Q86U38 636 aaKnown RBP23.55■■□□□ 1.36
SNIP1-203ENST00000493916 IPO4Q8TEX9 1081 aaKnown RBP23.55■■□□□ 1.36
SNIP1-203ENST00000493916 DDI1Q8WTU0 396 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 GAB3Q8WWW8 586 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 ERGIC2Q96RQ1 377 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 SLC2A11Q9BYW1 496 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 RAB23Q9ULC3 237 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 ATG2BQ96BY7 2078 aa23.55■■□□□ 1.36
SNIP1-203ENST00000493916 SMTNL1A8MU46 457 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms