RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 CA12O43570 354 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 NPR3P17342 541 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 RBL1P28749 1068 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
VCP-207ENST00000493886 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
VCP-207ENST00000493886 NR1H3Q13133 447 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 BBS9Q3SYG4 887 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 FBXO36Q8NEA4 188 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 NDRG1Q92597 394 aaKnown RBP14.27□□□□□ -0.13
VCP-207ENST00000493886 LPPQ93052 612 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 SENP8Q96LD8 212 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 MAGEB5Q9BZ81 275 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 CHST12Q9NRB3 414 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 PAK5Q9P286 719 aa14.27□□□□□ -0.13
VCP-207ENST00000493886 WDR91A4D1P6 747 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 EIF4E1BA6NMX2 242 aaKnown RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 ENO4A6NNW6 628 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 BEST1O76090 585 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 ZBED1O96006 694 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 THP07101 528 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 TPP2P29144 1249 aaPredicted RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 SSTR1P30872 391 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 PHBP35232 272 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 MATKP42679 507 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 CLNS1AP54105 237 aaKnown RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 BNIP1Q12981 228 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 PDCD2Q16342 344 aaPredicted RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 STRADAQ7RTN6 431 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 CCDC185Q8N715 623 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 ERP27Q96DN0 273 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 RTP4Q96DX8 246 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 MAGEB18Q96M61 343 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 PPCSQ9HAB8 311 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 ETNK1Q9HBU6 452 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 MTMR10Q9NXD2 777 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 BCLAF3A2AJT9 711 aaKnown RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 RANBP1P43487 201 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 FLT3LGP49771 235 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 KCNJ11Q14654 390 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 GALNTL6Q49A17 601 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 EFHC2Q5JST6 749 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 KIAA0319Q5VV43 1072 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 ZNF449Q6P9G9 518 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 KCTD15Q96SI1 283 aaPredicted RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 TRABDQ9H4I3 376 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 RXFP1Q9HBX9 757 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 DDX43Q9NXZ2 648 aaKnown RBP14.26□□□□□ -0.13
VCP-207ENST00000493886 SLC24A2Q9UI40 661 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
VCP-207ENST00000493886 A0A1W2PPM1 405 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CHADO15335 359 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 SEPT4O43236 478 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CA4P22748 312 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 RPA3P35244 121 aaPredicted RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 SULT1E1P49888 294 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 MRPS5P82675 430 aaKnown RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 IL9RQ01113 521 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 TRIM32Q13049 653 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CLEC20AQ6ZU45 233 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 C3orf62Q6ZUJ4 267 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 MYLK2Q9H1R3 596 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 RAB6BQ9NRW1 208 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 TLL2Q9Y6L7 1015 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 GOLGA8RI6L899 631 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 DAB1O75553 588 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 ANP32DO95626 131 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 TM4SF4P48230 202 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CLCNKBP51801 687 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 MGAT3Q09327 533 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 MTFR1Q15390 333 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 SLC25A52Q3SY17 297 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 PALM2Q8IXS6 379 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 KCTD13Q8WZ19 329 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CSPG4P5Q96PW8 444 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 LRRC4Q9HBW1 653 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 CRTAC1Q9NQ79 661 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 ARL5CA6NH57 179 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 GPR182O15218 404 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 DIAPH2O60879 1101 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 GEMIN4P57678 1058 aaKnown RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 GBE1Q04446 702 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 NAA25Q14CX7 972 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms