RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 LSM7Q9UK45 103 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 AGO1Q9UL18 857 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 STAP1Q9ULZ2 295 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 DUSP12Q9UNI6 340 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 TLR6Q9Y2C9 796 aa18.61■□□□□ 0.57
PDLIM7-208ENST00000493815 ANKRD62A6NC57 917 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 ARNTLO00327 626 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 CHADO15335 359 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 MOCS2O96007 188 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 IGLV3-27P01718 113 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 H2AFZP0C0S5 128 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 SRFP11831 508 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 GPD1P21695 349 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 SDC4P31431 198 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 IFNAR2P48551 515 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 HARS2P49590 506 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 VCPP55072 806 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 EIF4EBP2Q13542 120 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 Q6ZNB5 142 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 H2AFVQ71UI9 128 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 ARCQ7LC44 396 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 RNF34Q969K3 372 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 SLC39A13Q96H72 371 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 COL25A1Q9BXS0 654 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 HPS4Q9NQG7 708 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 XPO7Q9UIA9 1087 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 EPN1Q9Y6I3 576 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 NDUFA10O95299 355 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 CYP1A2P05177 515 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 DEUP1Q05D60 604 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 EML3Q32P44 896 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 CTNNBL1Q8WYA6 563 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 BTBD6Q96KE9 485 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
PDLIM7-208ENST00000493815 NCOR1O75376 2440 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 TMEM191CA6NGB0 347 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 TRDMT1O14717 391 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 GBP1P32455 592 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 SOX9P48436 509 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 ZNF252P-AS1Q0IIN9 211 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 ADGRG2Q8IZP9 1017 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 ACRBPQ8NEB7 543 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 IRF7Q92985 503 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 TMPRSS4Q9NRS4 437 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 HEBP1Q9NRV9 189 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 RRN3Q9NYV6 651 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 SCINQ9Y6U3 715 aa18.59■□□□□ 0.57
PDLIM7-208ENST00000493815 GOLGA6L7A0A1B0GV03 622 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 CCP110O43303 1012 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 LCA5LO95447 670 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 MAGEA1P43355 309 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 ZNF143P52747 638 aaPredicted RBP18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 RING1Q06587 406 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 NNTQ13423 1086 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 SPA17Q15506 151 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 LRRC8AQ8IWT6 810 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 FAM172AQ8WUF8 416 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 BHMTQ93088 406 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 DESI2Q9BSY9 194 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 MRPL47Q9HD33 250 aaKnown RBP18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 ANLNQ9NQW6 1124 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 SLC2A4RGQ9NR83 387 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 TBC1D14Q9P2M4 693 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 CA14Q9ULX7 337 aa18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 REXO2Q9Y3B8 237 aaKnown RBP18.58■□□□□ 0.57
PDLIM7-208ENST00000493815 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 I6L893 689 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 TMEM253P0C7T8 217 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 PSMA2P25787 234 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 CCR1P32246 355 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 RDXP35241 583 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 PTPN9P43378 593 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 RUNX3Q13761 415 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 DAB2IPQ5VWQ8 1189 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 NUGGCQ68CJ6 796 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 TPGS1Q6ZTW0 290 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 FAM131BQ86XD5 332 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 TMEM25Q86YD3 366 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 ATP2A3Q93084 1043 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 PGAP3Q96FM1 320 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 P2RY11Q96G91 374 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 DCLK3Q9C098 648 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 ECT2Q9H8V3 914 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 OSGEPQ9NPF4 335 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 KCNU1A8MYU2 1149 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 SLC9A3R1O14745 358 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 DCXO43602 365 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 APOEP02649 317 aa18.57■□□□□ 0.56
PDLIM7-208ENST00000493815 CYP17A1P05093 508 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms