RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DEKP35659 375 aaKnown RBP12.94□□□□□ -0.34
SNX17-208ENST00000493711 PGFP49763 221 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 PPP2R5DQ14738 602 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 HADHQ16836 314 aaKnown RBP12.94□□□□□ -0.34
SNX17-208ENST00000493711 AAK1Q2M2I8 961 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 BNIPLQ7Z465 357 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 TAC4Q86UU9 113 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
SNX17-208ENST00000493711 TPCN2Q8NHX9 752 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 RNF34Q969K3 372 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
SNX17-208ENST00000493711 TBCBQ99426 244 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 SLC46A2Q9BY10 475 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 TRPV4Q9HBA0 871 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX17-208ENST00000493711 OBP2AQ9NY56 170 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 RASAL2Q9UJF2 1139 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 ZNF510Q9Y2H8 683 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 DUSP10Q9Y6W6 482 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 TRANK1O15050 2925 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 XIRP2A4UGR9 3374 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 H3BQ06 376 aaPredicted RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 PRPSAP2O60256 369 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 BUB1BO60566 1050 aaPredicted RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 GJB6O95452 261 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 LATS1O95835 1130 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 TBX18O95935 607 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 APOEP02649 317 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 HARS2P49590 506 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 CXCR3P49682 368 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 TBX4P57082 545 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 ATP11AP98196 1134 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 NME3Q13232 169 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 MESDQ14696 234 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 BOLA3Q53S33 107 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 PSTKQ8IV42 348 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 NPAS3Q8IXF0 933 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 CELF5Q8N6W0 485 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 FGF13Q92913 245 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 SMARCD2Q92925 531 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 AZIN2Q96A70 460 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 WDCPQ9H6R7 721 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 TDP1Q9NUW8 608 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
SNX17-208ENST00000493711 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
SNX17-208ENST00000493711 MIF4GDA9UHW6 222 aaKnown RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 MBTPS2O43462 519 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 BUB1O43683 1085 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 SPOPO43791 374 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 MOCS3O95396 460 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 TUBB4AP04350 444 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 KRT7P08729 469 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 GJA1P17302 382 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 GBP2P32456 591 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 SLC11A2P49281 568 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ZNF135P52742 658 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 OGDHQ02218 1023 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 CLUL1Q15846 466 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 TRNP1Q6NT89 227 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 CC2D1AQ6P1N0 951 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 POLNQ7Z5Q5 900 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ATP6V0D2Q8N8Y2 350 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ZSCAN18Q8TBC5 510 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 SLC39A13Q96H72 371 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 IRX2Q9BZI1 471 aaPredicted RBP12.92□□□□□ -0.34
SNX17-208ENST00000493711 TRIM7Q9C029 511 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 RNF38Q9H0F5 515 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 SFMBT1Q9UHJ3 866 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 NUDT5Q9UKK9 219 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 TFR2Q9UP52 801 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX17-208ENST00000493711 CPQQ9Y646 472 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 PTPRDP23468 1912 aa12.92□□□□□ -0.34
SNX17-208ENST00000493711 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 LRCH4O75427 683 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms