RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SOX5P35711 763 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TMPRSS15P98073 1019 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 RHAGQ02094 409 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PRKCQQ04759 706 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 NFIXQ14938 502 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 MAPRE1Q15691 268 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SLC35G1Q2M3R5 365 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PRR16Q569H4 304 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 C6orf132Q5T0Z8 1188 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZDHHC24Q6UX98 284 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SNX29P2Q8IUI4 249 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CMTR1Q8N1G2 835 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC89Q8N998 374 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ST13P5Q8NFI4 369 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PJA1Q8NG27 643 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FBXO27Q8NI29 283 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TBC1D15Q8TC07 691 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 RASSF5Q8WWW0 418 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 OXNAD1Q96HP4 312 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FBXL18Q96ME1 805 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 C1orf50Q9BV19 199 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TARS2Q9BW92 718 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 MKRN2Q9H000 416 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 MAT2BQ9NZL9 334 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ACTR3BQ9P1U1 418 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PCDHA12Q9UN75 941 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 MRPS7Q9Y2R9 242 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CPQQ9Y646 472 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZNFX1Q9P2E3 1918 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZBBXA8MT70 800 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 H3BNX3 289 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 H2AFZP0C0S5 128 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 KITP10721 976 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 KCNJ1P48048 391 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SERPINH1P50454 418 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 AKR1D1P51857 326 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 RACK1P63244 317 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 NRF1Q16656 503 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CAVIN4Q5BKX8 364 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FIGNQ5HY92 759 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC137Q6PK04 289 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 H2AFVQ71UI9 128 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 DSG4Q86SJ6 1040 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF786Q8N393 782 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ANKRD53Q8N9V6 530 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 LEMD2Q8NC56 503 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZSWIM2Q8NEG5 633 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 OR5H6Q8NGV6 325 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF512Q96ME7 567 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM246Q9BRR3 403 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 INO80BQ9C086 356 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 STN1Q9H668 368 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 POLE4Q9NR33 117 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CNNM1Q9NRU3 951 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SQORQ9Y6N5 450 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PTPRFP10586 1907 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NOP56O00567 594 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CES2O00748 559 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 DNALI1O14645 258 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 AURKAO14965 403 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SCO1O75880 301 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ATE1O95260 518 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 MMP1P03956 469 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 RPA3P35244 121 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NPTX2P47972 431 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ARHGDIAP52565 204 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 RAD23AP54725 363 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 OLR1P78380 273 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PPP1R3AQ16821 1122 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ANO4Q32M45 955 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 AARS2Q5JTZ9 985 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SLFN13Q68D06 897 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 GPR180Q86V85 440 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CDR2LQ86X02 465 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ZCCHC7Q8N3Z6 543 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SLC4A11Q8NBS3 891 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ANGPTL6Q8NI99 470 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SPATA18Q8TC71 538 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ADAMTS16Q8TE57 1224 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TRUB1Q8WWH5 349 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 AKT1S1Q96B36 256 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PYM1Q9BRP8 204 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 RHOBTB2Q9BYZ6 727 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 GCOM2Q9BZD3 368 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TOR3AQ9H497 397 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 JMJD4Q9H9V9 463 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CXorf21Q9HAI6 301 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ADPRHL2Q9NX46 363 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 MOCS1Q9NZB8 636 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PCDH10Q9P2E7 1040 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 STRIP2Q9ULQ0 834 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 RAB26Q9ULW5 256 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF532Q9HCE3 1301 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 STMND1H3BQB6 276 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms