RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HSF2BPO75031 334 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 GRAP2O75791 330 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 HMBSP08397 361 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 NCAM1P13591 858 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 TCF3P15923 654 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 CENPCQ03188 943 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 EFHC1Q5JVL4 640 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 FAM102AQ5T9C2 384 aaPredicted RBP12.1□□□□□ -0.47
CTSA-209ENST00000493522 LAIR1Q6GTX8 287 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 KLHDC10Q6PID8 442 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 SLC30A5Q8TAD4 765 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 CSGALNACT1Q8TDX6 532 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 SYN2Q92777 582 aaPredicted RBP12.1□□□□□ -0.47
CTSA-209ENST00000493522 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 ZFRQ96KR1 1074 aaKnown RBP12.1□□□□□ -0.47
CTSA-209ENST00000493522 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
CTSA-209ENST00000493522 WNT6Q9Y6F9 365 aa12.1□□□□□ -0.47
CTSA-209ENST00000493522 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 TMCO5BA8MYB1 307 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 MFAP3LO75121 409 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 DAB1O75553 588 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 SERPING1P05155 500 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 TDGF1P13385 188 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 YWHAZP63104 245 aaKnown RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 ZXDBP98169 803 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 PDGFRLQ15198 375 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 TAF5Q15542 800 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 TRIM68Q6AZZ1 485 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 MSANTD2Q6P1R3 559 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 ZNF571Q7Z3V5 609 aaPredicted RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 VPS36Q86VN1 386 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 XYLT1Q86Y38 959 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 DQX1Q8TE96 717 aaKnown RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 OSCP1Q8WVF1 389 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 WBP2Q969T9 261 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 SYT11Q9BT88 431 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 POPDC2Q9HBU9 364 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 ASNSD1Q9NWL6 643 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 DUS2Q9NX74 493 aaKnown RBP12.09□□□□□ -0.47
CTSA-209ENST00000493522 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 NAALADL1Q9UQQ1 740 aa12.09□□□□□ -0.47
CTSA-209ENST00000493522 SLC9A3R1O14745 358 aaPredicted RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 LRP3O75074 770 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 CALB1P05937 261 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 GLI1P08151 1106 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PLEKP08567 350 aaPredicted RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 ARSAP15289 507 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 TGM1P22735 817 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 MMP8P22894 467 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 GABRB2P47870 512 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 MLLT6P55198 1093 aaPredicted RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 TNK2Q07912 1038 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 LRRC32Q14392 662 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 LPAL2Q16609 132 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 DCAF6Q58WW2 860 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 MON1BQ7L1V2 547 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PHLDB2Q86SQ0 1253 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 TAC4Q86UU9 113 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 CNGA4Q8IV77 575 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 DEFB106AQ8N104 65 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 CPA6Q8N4T0 437 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 OLIG1Q8TAK6 271 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 ADAM32Q8TC27 787 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 PLD4Q96BZ4 506 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 SERPINB11Q96P15 392 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTSA-209ENST00000493522 EBF3Q9H4W6 596 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 METTL5Q9NRN9 209 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 ABHD10Q9NUJ1 306 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
CTSA-209ENST00000493522 HBS1LQ9Y450 684 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 BZW2Q9Y6E2 419 aaKnown RBP12.08□□□□□ -0.48
CTSA-209ENST00000493522 ATG2BQ96BY7 2078 aa12.07□□□□□ -0.48
CTSA-209ENST00000493522 SYNJ2BP-COX16A0A087WUM0 186 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms