RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SNRPFP62306 86 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 CAMK2GQ13555 558 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 GPR155Q7Z3F1 870 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 TADA2BQ86TJ2 420 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 LHX5Q9H2C1 402 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 FBRSQ9HAH7 460 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 PNPLA8Q9NP80 782 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 AGPAT3Q9NRZ7 376 aa14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 SRPRBQ9Y5M8 271 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-211ENST00000493468 J3QKU1 62 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 CYP26A1O43174 497 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 TIMM44O43615 452 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 TSPAN3O60637 253 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 RFPL3O75679 317 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 EPHX1P07099 455 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 RARGP13631 454 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 JUPP14923 745 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 CD27P26842 260 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 ACSL1P33121 698 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 STAT6P42226 847 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 PSEN1P49768 467 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 MAP3K7CLP57077 242 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 ZBTB16Q05516 673 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 BMT2Q1RMZ1 405 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 ZNF699Q32M78 642 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 CCDC157Q569K6 752 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 ZNF667Q5HYK9 610 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 SERPINA13PQ6UXR4 307 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 EPM2AIP1Q7L775 607 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 FAM124AQ86V42 546 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 CRYBG2Q8N1P7 616 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 ZNF516Q92618 1163 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 CCDC127Q96BQ5 260 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 BIRC7Q96CA5 298 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 SLC2A11Q9BYW1 496 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 NMUR1Q9HB89 426 aa14.97□□□□□ -0.01
PRPF40A-211ENST00000493468 UBE4BO95155 1302 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 A0A1B0GTQ1 180 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 HHLA1C9JL84 531 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 ENC1O14682 589 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 MDM4O15151 490 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 TGFB1I1O43294 461 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 SEMA4FO95754 770 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 KLKB1P03952 638 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 CCDC130P13994 396 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 SEMG2Q02383 582 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 CFHR1Q03591 330 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 PDE4CQ08493 712 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 C10orf120Q5SQS8 335 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 GPRIN1Q7Z2K8 1008 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 UNC93AQ86WB7 457 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 CACUL1Q86Y37 369 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 CPXM2Q8N436 756 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 XXYLT1Q8NBI6 393 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 ZNF507Q8TCN5 953 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 ORAI3Q9BRQ5 295 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 BTBD1Q9H0C5 482 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 SDCBP2Q9H190 292 aa14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
PRPF40A-211ENST00000493468 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 ERVH48-1M5A8F1 160 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 VILLO15195 856 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CYBBP04839 570 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 AP3M2P53677 418 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 BCAT1P54687 386 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 COG7P83436 770 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 KCNT1Q5JUK3 1230 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 TMEM215Q68D42 235 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 PCSK4Q6UW60 755 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 LAYNQ6UX15 382 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CLEC20AQ6ZU45 233 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CCDC186Q7Z3E2 898 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CACTIN-AS1Q8N1I8 211 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 WBP1Q96G27 269 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 TMX3Q96JJ7 454 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CIPCQ9C0C6 399 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 TMEM245Q9H330 911 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 SGK2Q9HBY8 427 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 CLIC5Q9NZA1 410 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 AK5Q9Y6K8 562 aa14.95□□□□□ -0.02
PRPF40A-211ENST00000493468 SPTA1P02549 2419 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 A0A087X0B3 334 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 KCNK3O14649 394 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 YKT6O15498 198 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 PHACTR2O75167 634 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 P4HA1P13674 534 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 CORO1AP31146 461 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 ACADVLP49748 655 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 CYP2J2P51589 502 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 RACK1P63244 317 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 CLDN10P78369 228 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 IL9RQ01113 521 aa14.94□□□□□ -0.02
PRPF40A-211ENST00000493468 TARDBPQ13148 414 aaKnown RBP eCLIP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms