RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KRT27Q7Z3Y8 459 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 SPARTQ8N0X7 666 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 OR6B3Q8NGW1 331 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-218ENST00000493430 ZCRB1Q8TBF4 217 aaKnown RBP3.9□□□□□ -1.79
PTCD3-218ENST00000493430 BPIFB1Q8TDL5 484 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 TMEM171Q8WVE6 324 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 VCPIP1Q96JH7 1222 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 TRIM54Q9BYV2 358 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 MS4A7Q9GZW8 240 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-218ENST00000493430 GBA2Q9HCG7 927 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-218ENST00000493430 AASDHPPTQ9NRN7 309 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 MTMR4Q9NYA4 1195 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 ZNF580Q9UK33 172 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 ADAMTS7Q9UKP4 1686 aa3.9□□□□□ -1.79
PTCD3-218ENST00000493430 LAMB2P55268 1798 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 DLEC1Q9Y238 1755 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 KIF13BQ9NQT8 1826 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 LY6G6EA0A0G2JKS1 128 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 AP1G1O43747 822 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 TBC1D4O60343 1298 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 CT47B1P0C2W7 299 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 PRKAR1BP31321 381 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 NEK2P51955 445 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 ARFIP2P53365 341 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 COPB1P53618 953 aaKnown RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 LINC00205P59089 165 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 HTRA4P83105 476 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 ZNF267Q14586 743 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 RRS1Q15050 365 aaKnown RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 DAAM2Q86T65 1068 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 MPP5Q8N3R9 675 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 RAPGEF4Q8WZA2 1011 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 SIGLEC11Q96RL6 698 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 TESK2Q96S53 571 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 ADGRE3Q9BY15 652 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 USP22Q9UPT9 525 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 DRG1Q9Y295 367 aaKnown RBP3.89□□□□□ -1.79
PTCD3-218ENST00000493430 TIAM2Q8IVF5 1701 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 LAMB4A4D0S4 1761 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 BCORQ6W2J9 1755 aa3.89□□□□□ -1.79
PTCD3-218ENST00000493430 NSD3Q9BZ95 1437 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 A0A1W2PPL8 197 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 FAM90A10PA6NDY2 464 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 H3BML4 177 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 M0R3H8 397 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 ADAM10O14672 748 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 NPR1P16066 1061 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 NCLP19338 710 aaKnown RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 HTR1BP28222 390 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 HOXD9P28356 352 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 BCAT1P54687 386 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 ZNF91Q05481 1191 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 LMAN2Q12907 356 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 SLC13A2Q13183 592 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 TRIM71Q2Q1W2 868 aaKnown RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 TMEM65Q6PI78 240 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 PTCHD4Q6ZW05 846 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 DENND1CQ8IV53 801 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 LIX1LQ8IVB5 337 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 PNISRQ8TF01 805 aaKnown RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 DIS3LQ8TF46 1054 aaKnown RBP3.88□□□□□ -1.79
PTCD3-218ENST00000493430 MAP4K1Q92918 833 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 HOOK2Q96ED9 719 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 SNX15Q9NRS6 342 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 EVC2Q86UK5 1308 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 NUP98P52948 1817 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 CPDO75976 1380 aa3.88□□□□□ -1.79
PTCD3-218ENST00000493430 OVOS2A0A0G2JMS6 1433 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
PTCD3-218ENST00000493430 ANKRD36CQ5JPF3 1778 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 KDM3BQ7LBC6 1761 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 ARFGEF1Q9Y6D6 1849 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 ABLIM3O94929 683 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 OAZ2O95190 189 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 RAB32Q13637 225 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 ANO7Q6IWH7 933 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 TOM1L2Q6ZVM7 507 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 DPH1Q9BZG8 443 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 FOXP1Q9H334 677 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-218ENST00000493430 XPNPEP3Q9NQH7 507 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 POT1Q9NUX5 634 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 MGAT4CQ9UBM8 478 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 LPAR3Q9UBY5 353 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 CNTNAP2Q9UHC6 1331 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 NSD2O96028 1365 aa3.87□□□□□ -1.79
PTCD3-218ENST00000493430 CD8B2A6NJW9 211 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 UBXN7O94888 489 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 KITP10721 976 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 APEHP13798 732 aaKnown RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 CREB1P16220 341 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 HSPA6P17066 643 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 EPHA3P29320 983 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 TNNT2P45379 298 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 DIO1P49895 249 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 ID2Q02363 134 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms