RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FYB2Q5VWT5 728 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 TTC39CQ8N584 583 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 C1orf216Q8TAB5 229 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 MDM1Q8TC05 714 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 CYFIP2Q96F07 1278 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 ZNF396Q96N95 335 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 NT5C1AQ9BXI3 368 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 NMUR1Q9HB89 426 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 FAM49BQ9NUQ9 324 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 DMAC2Q9NW81 257 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 OSER1Q9NX31 292 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 ELOVL2Q9NXB9 296 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 PLK2Q9NYY3 685 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 MTMR6Q9Y217 621 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 USP3Q9Y6I4 520 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 LOC400499M0QZD8 3231 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 A0A087WV48 116 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 A0A1W2PQH9 124 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 KCNJ18B7U540 433 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 MAPK13O15264 365 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 PCDHGA12O60330 932 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 VNN1O95497 513 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 CDK4P11802 303 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ADORA2BP29275 332 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ASPAP45381 313 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 COPAP53621 1224 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ZBTB16Q05516 673 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ENPEPQ07075 957 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ZNF234Q14588 700 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 GEN1Q17RS7 908 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 SERPINA13PQ6UXR4 307 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 SV2AQ7L0J3 742 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 GPRIN1Q7Z2K8 1008 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 C12orf29Q8N999 325 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 OR2T3Q8NH03 318 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 PLEKHO2Q8TD55 490 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 BHMTQ93088 406 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 PIWIL1Q96J94 861 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 SLC39A2Q9NP94 309 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 TOR4AQ9NXH8 423 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 EIF2B4Q9UI10 523 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 FNDC3AQ9Y2H6 1198 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
SNRNP200-207ENST00000493271 ACACAQ13085 2346 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 PDXKO00764 312 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 KIF20AO95235 890 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 EPHX1P07099 455 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 PIK3CAP42336 1068 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 CCT8P50990 548 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 SLC8A3P57103 927 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 CAMK2GQ13555 558 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 MPPE1Q53F39 396 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 FAM217AQ8IXS0 508 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 CCDC150Q8NCX0 1101 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 WFIKKN2Q8TEU8 576 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 HNRNPLLQ8WVV9 542 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 GOLGA1Q92805 767 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 IGSF8Q969P0 613 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 PLD4Q96BZ4 506 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 UBXN6Q9BZV1 441 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 CIPCQ9C0C6 399 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 LHX5Q9H2C1 402 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 IL21RQ9HBE5 538 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 FAM13BQ9NYF5 915 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 HMGXB4Q9UGU5 601 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 RASAL2Q9UJF2 1139 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 FRMD4BQ9Y2L6 1034 aa11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-207ENST00000493271 PLXNB3Q9ULL4 1909 aa11.52□□□□□ -0.56
SNRNP200-207ENST00000493271 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 TK2O00142 265 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 MDM4O15151 490 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 KLKB1P03952 638 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 CORO1AP31146 461 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 BNC1Q01954 994 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SFSWAPQ12872 951 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SMAD1Q15797 465 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 TTC31Q49AM3 519 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SCD5Q86SK9 330 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 ZNF557Q8N988 423 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 DDI1Q8WTU0 396 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SKA1Q96BD8 255 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 ERLEC1Q96DZ1 483 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 UBL7Q96S82 380 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms