RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 OPRD1P41143 372 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 PRKCIP41743 596 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 RPS9P46781 194 aaKnown RBP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 GALK1P51570 392 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 NUBP1P53384 320 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 ZBED6P86452 979 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 RING1Q06587 406 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 TMEM196Q5HYL7 178 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 SPECC1LQ69YQ0 1117 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 FSTL4Q6MZW2 842 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 DTWD2Q8NBA8 298 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 CLDN23Q96B33 292 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 PRRX2Q99811 253 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 HAUS4Q9H6D7 363 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 WDR35Q9P2L0 1181 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SYNJ2BP-COX16A0A087WUM0 186 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 IGLV3-25P01717 112 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 APOEP02649 317 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 CYBBP04839 570 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 CALB1P05937 261 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 TPM1P09493 284 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 TYRP14679 529 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 GBP1P32455 592 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 MATKP42679 507 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SLC11A2P49281 568 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 FZD5Q13467 585 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 CCINQ13939 588 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 TRIM14Q14142 442 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 TDRD12Q587J7 1177 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 PPP1R2P3Q6NXS1 205 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 C12orf40Q86WS4 652 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 CPXM2Q8N436 756 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 NAT16Q8N8M0 369 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SYN2Q92777 582 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 BHMTQ93088 406 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 FCRL2Q96LA5 508 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 XPO6Q96QU8 1125 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SYT11Q9BT88 431 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 RBSNQ9H1K0 784 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 FBRSL1Q9HCM7 1045 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 METTL5Q9NRN9 209 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 SPATA6Q9NWH7 488 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-209ENST00000493166 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 RRN3Q9NYV6 651 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 COX16Q9P0S2 106 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
CLIP2-209ENST00000493166 M0QYT0 321 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 MOCS2O96007 188 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 EGFP01133 1207 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 SKILP12757 684 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 CASP14P31944 242 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 SLC6A11P48066 632 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 SULT1E1P49888 294 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 KDSRQ06136 332 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 PTP4A2Q12974 167 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 NME3Q13232 169 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 PREPLQ4J6C6 727 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ZC3H12AQ5D1E8 599 aaKnown RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ADGRF1Q5T601 910 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ACAD10Q6JQN1 1059 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ZNF571Q7Z3V5 609 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 PHLDB2Q86SQ0 1253 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 FAM217AQ8IXS0 508 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 SYNPOQ8N3V7 929 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 DDI1Q8WTU0 396 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 RNF34Q969K3 372 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 PNKPQ96T60 521 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 TRIM5Q9C035 493 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 KCNH6Q9H252 994 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 CHRDQ9H2X0 955 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
CLIP2-209ENST00000493166 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
CLIP2-209ENST00000493166 DEC1Q9P2X7 70 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms