RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 LRRC4CQ9HCJ2 640 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 SAYSD1Q9NPB0 183 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 COX16Q9P0S2 106 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
PTPN7-216ENST00000492977 PRG3Q9Y2Y8 225 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-216ENST00000492977 HTTP42858 3142 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 TTC3P53804 2025 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 SF3B1O75533 1304 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPN7-216ENST00000492977 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-216ENST00000492977 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 HACD1B0YJ81 288 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 KCNN4O15554 427 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 AMPD1P23109 780 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 RBL1P28749 1068 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 GRIK1P39086 918 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 HCAR3P49019 387 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 ARL4CP56559 192 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 MAGOHP61326 146 aaKnown RBP14.55□□□□□ -0.08
PTPN7-216ENST00000492977 GBE1Q04446 702 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 MRPL58Q14197 206 aaKnown RBP14.55□□□□□ -0.08
PTPN7-216ENST00000492977 HIF1AQ16665 826 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 SLC39A12Q504Y0 691 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 NCBP2-AS2Q69YL0 99 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 VSTM1Q6UX27 236 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 SLC39A5Q6ZMH5 540 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 NPAS4Q8IUM7 802 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 TOX2Q96NM4 488 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 MRPL9Q9BYD2 267 aaKnown RBP14.55□□□□□ -0.08
PTPN7-216ENST00000492977 HIPK3Q9H422 1215 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 ARHGEF4Q9NR80 690 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 TMEM51Q9NW97 253 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 DDIT4Q9NX09 232 aa14.55□□□□□ -0.08
PTPN7-216ENST00000492977 OR6C75A6NL08 312 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 TNFRSF10BO14763 440 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 CHADO15335 359 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 ZNF189O75820 626 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 MYCP01106 439 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 IVLP07476 585 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 CXCR3P49682 368 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 PPP2R2AP63151 447 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 SLC10A2Q12908 348 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 CBLBQ13191 982 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 AUHQ13825 339 aaKnown RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 STAT4Q14765 748 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 TNFAIP8L3Q5GJ75 292 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 VARS2Q5ST30 1063 aaKnown RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 EPS8L3Q8TE67 593 aaKnown RBP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 C9orf72Q96LT7 481 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 QKIQ96PU8 341 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 TMEM175Q9BSA9 504 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN7-216ENST00000492977 DTLQ9NZJ0 730 aa14.54□□□□□ -0.08
PTPN7-216ENST00000492977 A0A087WUV0 522 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 E7ESA3 106 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 GCATO75600 419 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 DGKIO75912 1065 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 HPDP32754 393 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 MAGEA11P43364 429 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 ATP1A2P50993 1020 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 IRAK1P51617 712 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 SLC5A3P53794 718 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 BASP1P80723 227 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 ELAVL2Q12926 359 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 PDIA2Q13087 525 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 SEMA3BQ13214 749 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 DPYSQ14117 519 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 ANKRD22Q5VYY1 191 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 KCNT2Q6UVM3 1135 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 PPP1R21Q6ZMI0 780 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 RFX8Q6ZV50 586 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 SCAMP5Q8TAC9 235 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 ADAM32Q8TC27 787 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 EDEM1Q92611 657 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 C8orf48Q96LL4 319 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 OLFM3Q96PB7 478 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 FRMD8Q9BZ67 464 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 WDCPQ9H6R7 721 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 CNOT10Q9H9A5 744 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 ABCC13Q9NSE7 274 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 XPO7Q9UIA9 1087 aaKnown RBP14.53□□□□□ -0.08
PTPN7-216ENST00000492977 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
PTPN7-216ENST00000492977 C5orf60A6NFR6 353 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 TRIM66O15016 1216 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 CREB3O43889 395 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 OR4Q2P0C623 313 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 FGFR3P22607 806 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 ATP5DP30049 168 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 MAGEA6P43360 314 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 GNGT1P63211 74 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 FAAP100Q0VG06 881 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 SMARCB1Q12824 385 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 KCNJ11Q14654 390 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 PAFAH1B3Q15102 231 aaKnown RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 SKIDA1Q1XH10 827 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms