RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZNF397Q8NF99 534 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 DQX1Q8TE96 717 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 ACDQ96AP0 544 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 DEC1Q9P2X7 70 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 NOCTQ9UK39 431 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 NAALADL1Q9UQQ1 740 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TLR6Q9Y2C9 796 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 PCDHGA2Q9Y5H1 932 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 K7EQS6 105 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 TEX33O43247 280 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 DAB1O75553 588 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 CYBBP04839 570 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 MMEP08473 750 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 TDGF1P13385 188 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 SCNN1AP37088 669 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 TNFRSF4P43489 277 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 GABRB2P47870 512 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC6A11P48066 632 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 NOMO3P69849 1222 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 MRPS21P82921 87 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 SATB1Q01826 763 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC6A3Q01959 620 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 KDSRQ06136 332 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 GRAMD4Q6IC98 578 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 OR6B2Q6IFH4 312 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 ERICH1Q86X53 443 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 TERB1Q8NA31 727 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 EZH1Q92800 747 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 NELL1Q92832 810 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 PIWIL1Q96J94 861 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 DNAJC17Q9NVM6 304 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZSCAN32Q9NX65 697 aa11.1□□□□□ -0.63
CDC42SE1-206ENST00000492796 IRAK2O43187 625 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 TRUB2O95900 331 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 IGLV3-25P01717 112 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 APOEP02649 317 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 FERP16591 822 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 HOXA6P31267 233 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 GBP1P32455 592 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC11A2P49281 568 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 CDK17Q00537 523 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 FANCCQ00597 558 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 FMO1Q01740 532 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 MTA1Q13330 715 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 NR1I3Q14994 352 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 MPPE1Q53F39 396 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 DCAF6Q58WW2 860 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 ADGRF1Q5T601 910 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SYPL2Q5VXT5 272 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SYT13Q7L8C5 426 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 TAC4Q86UU9 113 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZBTB44Q8NCP5 570 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 RPLP0P6Q8NHW5 317 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 USP33Q8TEY7 942 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC39A13Q96H72 371 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 FCRL2Q96LA5 508 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 TMEM51Q9NW97 253 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 RRN3Q9NYV6 651 aa11.09□□□□□ -0.63
CDC42SE1-206ENST00000492796 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 TBC1D3BA6NDS4 549 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 K7ESF4 209 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 GFRA2O00451 464 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 ACSL4O60488 711 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC2A3P11169 496 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 CHRNB2P17787 502 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 NOS2P35228 1153 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 MATKP42679 507 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 DGKGP49619 791 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 CENPCQ03188 943 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 EIF4EBP2Q13542 120 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 TAF5Q15542 800 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 FIGNQ5HY92 759 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 C10orf76Q5T2E6 689 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 FAM102AQ5T9C2 384 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 NAA35Q5VZE5 725 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms