RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SHC3Q92529 594 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 ST7Q9NRC1 585 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 TJP2Q9UDY2 1190 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 THADAQ6YHU6 1953 aa12.32□□□□□ -0.44
MDC1-207ENST00000492462 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
MDC1-207ENST00000492462 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 TSPAN3O60637 253 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 PENKP01210 267 aaPredicted RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 LTFP02788 710 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 RETP07949 1114 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 BCKDHBP21953 392 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 GNA15P30679 374 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 RPL34P49207 117 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 DGKGP49619 791 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 MFAP3P55082 362 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 MSANTD2Q6P1R3 559 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 WDTC1Q8N5D0 677 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 ZNF513Q8N8E2 541 aaPredicted RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 XPO6Q96QU8 1125 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 TUBGCP2Q9BSJ2 902 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 DCLK3Q9C098 648 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 NDST4Q9H3R1 872 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 FBXO10Q9UK96 956 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 DNAJC12Q9UKB3 198 aa12.31□□□□□ -0.44
MDC1-207ENST00000492462 HBS1LQ9Y450 684 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
MDC1-207ENST00000492462 NUP205Q92621 2012 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 FOXN3O00409 490 aaPredicted RBP12.3□□□□□ -0.44
MDC1-207ENST00000492462 PAPSS1O43252 624 aaPredicted RBP12.3□□□□□ -0.44
MDC1-207ENST00000492462 KCNJ12Q14500 433 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 PLK5Q496M5 336 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 EOGTQ5NDL2 527 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 RBM43Q6ZSC3 357 aaKnown RBP12.3□□□□□ -0.44
MDC1-207ENST00000492462 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 FAM217AQ8IXS0 508 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 CPXM2Q8N436 756 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 RLN3Q8WXF3 142 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 PIWIL1Q96J94 861 aaKnown RBP12.3□□□□□ -0.44
MDC1-207ENST00000492462 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
MDC1-207ENST00000492462 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 TAB2Q9NYJ8 693 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 ZNF510Q9Y2H8 683 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
MDC1-207ENST00000492462 ASH1LQ9NR48 2969 aaKnown RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 GOLGA6L7A0A1B0GV03 622 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 E5RJQ4 531 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 GFRA2O00451 464 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 FBXO21O94952 628 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 ADRB1P08588 477 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 CLCN1P35523 988 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 CHKAP35790 457 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 SGSHP51688 502 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 PDCLQ13371 301 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 SYPL2Q5VXT5 272 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 C11orf57Q6ZUT1 292 aaPredicted RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 HMGB4Q8WW32 186 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
MDC1-207ENST00000492462 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 CACNA2D2Q9NY47 1150 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 NFE2L3Q9Y4A8 694 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 RAD54BQ9Y620 910 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 SPEGQ15772 3267 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
MDC1-207ENST00000492462 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 LAMA1P25391 3075 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 A0A1W2PQF6 199 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms