RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 STARD13Q9Y3M8 1113 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PCDHB4Q9Y5E5 795 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 CNOT1A5YKK6 2376 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 PENKP01210 267 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 CORO1AP31146 461 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 RGS7P49802 495 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 YWHAEP62258 255 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 FANCCQ00597 558 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 APBA1Q02410 837 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 GCNT1Q02742 428 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 CNGA2Q16280 664 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 EXOC3L4Q17RC7 722 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 HSF5Q4G112 596 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 FYB2Q5VWT5 728 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 EGFLAMQ63HQ2 1017 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 GRAMD4Q6IC98 578 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 DGLUCYQ7Z3D6 616 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 TADA2BQ86TJ2 420 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 GAS2L3Q86XJ1 694 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 FAM217AQ8IXS0 508 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 EDEM1Q92611 657 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 CDK5RAP1Q96SZ6 601 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 CLEC4EQ9ULY5 219 aa13.28□□□□□ -0.28
SEC61A1-206ENST00000491668 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC12A8A0AV02 714 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 GFRA2O00451 464 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 PIK3R2O00459 728 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 CBFA2T2O43439 604 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 SETSIPP0DME0 302 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 WASP42768 502 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 UBASH3AP57075 661 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC8A3P57103 927 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 DAOAP59103 153 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 COG7P83436 770 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 FOXK2Q01167 660 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 MIIPQ5JXC2 388 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 EOGTQ5NDL2 527 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 GJB7Q6PEY0 223 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 DENND1CQ8IV53 801 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 SCML4Q8N228 414 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 ZNF513Q8N8E2 541 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 CLEC4CQ8WTT0 213 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 CRACR2AQ9BSW2 395 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 ACP6Q9NPH0 428 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 HESX1Q9UBX0 185 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 SFMBT1Q9UHJ3 866 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 MBD1Q9UIS9 605 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 CHD8Q9HCK8 2581 aa13.27□□□□□ -0.29
SEC61A1-206ENST00000491668 DCDC2BA2VCK2 349 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 M0QYV0 167 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 FYNP06241 537 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 ZNF806P0C7X5 589 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 LCP1P13796 627 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 P2RY2P41231 377 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 RPL34P49207 117 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 DGKGP49619 791 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 MFAP3P55082 362 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 GON4LQ3T8J9 2241 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 RSRC2Q7L4I2 434 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 FMNL3Q8IVF7 1028 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 HMGB4Q8WW32 186 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 CNGB3Q9NQW8 809 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 IFNKQ9P0W0 207 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
SEC61A1-206ENST00000491668 THADAQ6YHU6 1953 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 PLXND1Q9Y4D7 1925 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 TCRBV21S2A2A0A5A6 115 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 WASH3PC4AMC7 463 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC30A4O14863 429 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 GABRG2P18507 467 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC9A1P19634 815 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 NTSR1P30989 418 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 MPLP40238 635 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms