RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CHPFQ8IZ52 775 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 PGBD3Q8N328 593 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 RNF139Q8WU17 664 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 TCEAL3Q969E4 200 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 PLD4Q96BZ4 506 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 UBE2TQ9NPD8 197 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-219ENST00000491183 MBD1Q9UIS9 605 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-219ENST00000491183 SLC27A6Q9Y2P4 619 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 HBS1LQ9Y450 684 aaKnown RBP18.82■□□□□ 0.6
HMGN1-219ENST00000491183 PLXND1Q9Y4D7 1925 aa18.82■□□□□ 0.6
HMGN1-219ENST00000491183 M0QYV0 167 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 CAVIN2O95810 425 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 MFAP3P55082 362 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 GEN1Q17RS7 908 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 KIAA1211LQ6NV74 962 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 CLEC4CQ8WTT0 213 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 IRGQQ8WZA9 623 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 ERLEC1Q96DZ1 483 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 HSFY1Q96LI6 401 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 GABRG3Q99928 467 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 CACNA2D2Q9NY47 1150 aa18.81■□□□□ 0.6
HMGN1-219ENST00000491183 WASH3PC4AMC7 463 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 TM4SF5O14894 197 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 GPD2P43304 727 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 LIMK1P53667 647 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 SDE2Q6IQ49 451 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 MSANTD2Q6P1R3 559 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 GJB7Q6PEY0 223 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 IPO4Q8TEX9 1081 aaKnown RBP18.8■□□□□ 0.6
HMGN1-219ENST00000491183 PIWIL1Q96J94 861 aaKnown RBP18.8■□□□□ 0.6
HMGN1-219ENST00000491183 CRACR2AQ9BSW2 395 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
HMGN1-219ENST00000491183 TNRC6BQ9UPQ9 1833 aaKnown RBP18.79■□□□□ 0.6
HMGN1-219ENST00000491183 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 GFRA2O00451 464 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 MSI1O43347 362 aaKnown RBP18.79■□□□□ 0.6
HMGN1-219ENST00000491183 TSPAN3O60637 253 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 CYBBP04839 570 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 FYNP06241 537 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 KRT5P13647 590 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 SLC9A1P19634 815 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 RPL34P49207 117 aaKnown RBP18.79■□□□□ 0.6
HMGN1-219ENST00000491183 DHPSP49366 369 aaPredicted RBP18.79■□□□□ 0.6
HMGN1-219ENST00000491183 HARS2P49590 506 aaKnown RBP18.79■□□□□ 0.6
HMGN1-219ENST00000491183 APBA1Q02410 837 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 DENND1BQ6P3S1 775 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 TMEFF1Q8IYR6 380 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 MLKLQ8NB16 471 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 DDI1Q8WTU0 396 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 MIS12Q9H081 205 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 ACP6Q9NPH0 428 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 STOML2Q9UJZ1 356 aa18.79■□□□□ 0.6
HMGN1-219ENST00000491183 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 MAP3K13O43283 966 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 LTFP02788 710 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 NDUFV2P19404 249 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 BYSLQ13895 437 aaKnown RBP18.78■□□□□ 0.6
HMGN1-219ENST00000491183 MPPE1Q53F39 396 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 STPG1Q5TH74 334 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 TRIM65Q6PJ69 517 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 SCUBE3Q8IX30 993 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 SPACA7Q96KW9 195 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 SLC2A11Q9BYW1 496 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 SLC6A17Q9H1V8 727 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 CLSTN2Q9H4D0 955 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 CALCOCO1Q9P1Z2 691 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 STON1Q9Y6Q2 735 aa18.78■□□□□ 0.6
HMGN1-219ENST00000491183 BECN2A8MW95 431 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 PATE3B3GLJ2 98 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 LETM1O95202 739 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-219ENST00000491183 IGLV3-27P01718 113 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 HOXD9P28356 352 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-219ENST00000491183 PTGER3P43115 390 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 ENPP2Q13822 863 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 TMEM215Q68D42 235 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 LPCAT2Q7L5N7 544 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 CYP2U1Q7Z449 544 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 ZNF606Q8WXB4 792 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 PIGKQ92643 395 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 ELOVL2Q9NXB9 296 aa18.77■□□□□ 0.6
HMGN1-219ENST00000491183 THAP10Q9P2Z0 257 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-219ENST00000491183 GOLGA6L7A0A1B0GV03 622 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 FBXO21O94952 628 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 LATS1O95835 1130 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 IL12RB1P42701 662 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 SGSHP51688 502 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 PPM1JQ5JR12 505 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 ADGRF1Q5T601 910 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 IL31Q6EBC2 164 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 GBP6Q6ZN66 633 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 TMA16Q96EY4 203 aaKnown RBP18.76■□□□□ 0.59
HMGN1-219ENST00000491183 MRGPRX1Q96LB2 322 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 SLC4A5Q9BY07 1137 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 CD93Q9NPY3 652 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 ST7Q9NRC1 585 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 TMEM74BQ9NUR3 256 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 CYTH4Q9UIA0 394 aa18.76■□□□□ 0.59
HMGN1-219ENST00000491183 IGHV1OR15-9A0A0B4J2B8 117 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms