RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	APOA4	P06727	396 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	POLB	P06746	335 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SRGAP2B	P0DMP2	458 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SMIM10L2A	P0DMW4	78 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SMIM10L2B	P0DMW5	78 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	CCNB1	P14635	433 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	TAC1	P20366	129 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	GRK2	P25098	689 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	YY1	P25490	414 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	HOXA11	P31270	313 aa	Predicted RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	ADCYAP1R1	P41586	468 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	IFNAR2	P48551	515 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	CDH8	P55286	799 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	GJA9	P57773	515 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	YWHAG	P61981	247 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	OGDH	Q02218	1023 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SLC18A2	Q05940	514 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	ASPH	Q12797	758 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SEMA5A	Q13591	1074 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PRPSAP1	Q14558	356 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	KCNJ11	Q14654	390 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	BBS9	Q3SYG4	887 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	GALNTL6	Q49A17	601 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	ATP13A4	Q4VNC1	1196 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SEZ6	Q53EL9	994 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	C6orf163	Q5TEZ5	329 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	LRRC8B	Q6P9F7	803 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	CYB5D1	Q6P9G0	228 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	FAM183BP	Q6ZVS7	135 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	C7orf31	Q8N865	590 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	BANP	Q8N9N5	519 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	FAM71D	Q8N9W8	422 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	NLGN2	Q8NFZ4	835 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	GSDMB	Q8TAX9	411 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	APOPT1	Q96IL0	206 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	CLMN	Q96JQ2	1002 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PAFAH2	Q99487	392 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	EBNA1BP2	Q99848	306 aa	Known RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PAIP2	Q9BPZ3	127 aa	Known RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	OSBPL7	Q9BZF2	842 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	KATNBL1	Q9H079	304 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SMYD3	Q9H7B4	428 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	NRDE2	Q9H7Z3	1164 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PCDH18	Q9HCL0	1135 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	SLC40A1	Q9NP59	571 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	NGRN	Q9NPE2	291 aa	Known RBP	6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PDGFC	Q9NRA1	345 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	ETNK2	Q9NVF9	386 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	HACD3	Q9P035	362 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	TBK1	Q9UHD2	729 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	CDH9	Q9ULB4	789 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	WDR90	Q96KV7	1748 aa		6.56	□□□□□ -1.36
FN1-223	ENST00000490833	PTPRF	P10586	1907 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833		A0A0A0MRY4	1105 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DYNC1LI2	O43237	492 aa	Predicted RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DNAJC6	O75061	913 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ZNF623	O75123	536 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DUSP11	O75319	330 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DAB1	O75553	588 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CABYR	O75952	493 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	LUC7L3	O95232	432 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	APOE	P02649	317 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	VTN	P04004	478 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	EDN1	P05305	212 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TH	P07101	528 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	IQCF3	P0C7M6	154 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	FAM200B	P0CF97	657 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SLC2A3	P11169	496 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	AKR1A1	P14550	325 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	NQO1	P15559	274 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	NPR3	P17342	541 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CYP2F1	P24903	491 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	IL1R2	P27930	398 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	L1CAM	P32004	1257 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CRHR1	P34998	444 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	NPY2R	P49146	381 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	USP46	P62068	366 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DYNLT1	P63172	113 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	NKX3-2	P78367	333 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	MRPS5	P82675	430 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	GUCA2A	Q02747	115 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SCAP	Q12770	1279 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SREBF2	Q12772	1141 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	PTK7	Q13308	1070 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	KRT72	Q14CN4	511 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	UGP2	Q16851	508 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SOWAHA	Q2M3V2	549 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CCDC153	Q494R4	210 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	KCNT1	Q5JUK3	1230 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	WASHC2D	Q5SRD0	308 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	MARCH8	Q5T0T0	291 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	MFSD14C	Q5VZR4	134 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	FAM91A1	Q658Y4	838 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SCARA3	Q6AZY7	606 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	PHLDB2	Q86SQ0	1253 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ACOT1	Q86TX2	421 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TLK2	Q86UE8	772 aa		6.55	□□□□□ -1.36

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