RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GRIK1P39086 918 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 UNC93AQ86WB7 457 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MAML2Q8IZL2 1156 aaPredicted RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 TTC8Q8TAM2 541 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CD101Q93033 1021 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 NDRG2Q9UN36 371 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 CCL26Q9Y258 94 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MRPS17Q9Y2R5 130 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 TARSL2A2RTX5 802 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 CCDC66A2RUB6 948 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 A8MXQ7 604 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CTNNA1P35221 906 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 SLC1A1P43005 524 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 SOX9P48436 509 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 DCAF12L1Q5VU92 463 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MON1AQ86VX9 555 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CELF5Q8N6W0 485 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 BPIFB1Q8TDL5 484 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 CSGALNACT1Q8TDX6 532 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 FAM3CQ92520 227 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 MRPS31Q92665 395 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 USP13Q92995 863 aaPredicted RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 RBM12Q9NTZ6 932 aaKnown RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 UXTQ9UBK9 157 aaPredicted RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 LCMT1Q9UIC8 334 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 RAB21Q9UL25 225 aa16.37■□□□□ 0.21
PCCB-218ENST00000490504 TTC7AQ9ULT0 858 aaPredicted RBP16.37■□□□□ 0.21
PCCB-218ENST00000490504 M0QYV0 167 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 GFRA3O60609 400 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 PROSCO94903 275 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCCB-218ENST00000490504 AVPR1AP37288 418 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 CACNA2D1P54289 1103 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 USP46P62068 366 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 TNK2Q07912 1038 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 LCLAT1Q6UWP7 414 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 ASCL5Q7RTU5 278 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 RIN3Q8TB24 985 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 ALG3Q92685 438 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 SPATA17Q96L03 361 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 PNKPQ96T60 521 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 B3GNT5Q9BYG0 378 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
PCCB-218ENST00000490504 GTSE1Q9NYZ3 720 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 ZMYM5Q9UJ78 669 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
PCCB-218ENST00000490504 TCRBV5S1A1TA0A578 114 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 F8VP50 259 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 CLDN5O00501 218 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 NCAM2O15394 837 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 SP9P0CG40 484 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 MAN1A1P33908 653 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 PEX5P50542 639 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 RNASE9P60153 205 aaKnown RBP16.35■□□□□ 0.21
PCCB-218ENST00000490504 BRD3Q15059 726 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 PTPN20Q4JDL3 420 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 B3GALNT2Q8NCR0 500 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 KRT35Q92764 455 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 SLC22A12Q96S37 553 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 CYP2S1Q96SQ9 504 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 NAP1L3Q99457 506 aaPredicted RBP16.35■□□□□ 0.21
PCCB-218ENST00000490504 TRPC7Q9HCX4 862 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 TMEM59LQ9UK28 342 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 VPS13AQ96RL7 3174 aa16.35■□□□□ 0.21
PCCB-218ENST00000490504 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 MCM3P25205 808 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 MAGEA9P43362 315 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 MARCKSL1P49006 195 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 CLCN6P51797 869 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 MLLT6P55198 1093 aaPredicted RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 GSCP56915 257 aaPredicted RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 GLE1Q53GS7 698 aaKnown RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 WDR93Q6P2C0 686 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 ACOT1Q86TX2 421 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 CPNE8Q86YQ8 564 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 RUBCNQ92622 972 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 LMAN1LQ9HAT1 526 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 GKN1Q9NS71 199 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 THG1LQ9NWX6 298 aaKnown RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 WDR35Q9P2L0 1181 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 IP6K2Q9UHH9 426 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 R4GN57 208 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 F5P12259 2224 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 CCDC151A5D8V7 595 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 C2orf78A6NCI8 922 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 TMEM191CA6NGB0 347 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms