RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 FBXO10Q9UK96 956 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 HCN2Q9UL51 889 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 NFE2L3Q9Y4A8 694 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 TCRBV21S2A2A0A5A6 115 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 PRRT4C9JH25 899 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 E5RJQ4 531 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 LATS1O95835 1130 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 NCAM1P13591 858 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 HOXB2P14652 356 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 TGM1P22735 817 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 EEF1GP26641 437 aaKnown RBP20.6■□□□□ 0.89
SMC4-222ENST00000490207 ID4P47928 161 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 TCP11X2Q5H9J9 407 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 SMYD5Q6GMV2 418 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 SCUBE3Q8IX30 993 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 SLC4A5Q9BY07 1137 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 BCCIPQ9P287 314 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMC4-222ENST00000490207 CYTH4Q9UIA0 394 aa20.6■□□□□ 0.89
SMC4-222ENST00000490207 DCLK1O15075 740 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 EPN2O95208 641 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 NTSR1P30989 418 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 WASP42768 502 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 ZNF445P59923 1031 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 LMNB2Q03252 620 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 PTK2Q05397 1052 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 PDCLQ13371 301 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 PLK5Q496M5 336 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 USP39Q53GS9 565 aaKnown RBP20.59■□□□□ 0.89
SMC4-222ENST00000490207 ENOX1Q8TC92 643 aaKnown RBP20.59■□□□□ 0.89
SMC4-222ENST00000490207 DQX1Q8TE96 717 aaKnown RBP20.59■□□□□ 0.89
SMC4-222ENST00000490207 DDI1Q8WTU0 396 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 HMGB4Q8WW32 186 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 LOXL4Q96JB6 756 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 ZC3H10Q96K80 434 aaKnown RBP20.59■□□□□ 0.89
SMC4-222ENST00000490207 TRIM62Q9BVG3 475 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 STOML2Q9UJZ1 356 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 SLC27A6Q9Y2P4 619 aa20.59■□□□□ 0.89
SMC4-222ENST00000490207 SPTBN4Q9H254 2564 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 PAPSS1O43252 624 aaPredicted RBP20.58■□□□□ 0.89
SMC4-222ENST00000490207 MBD3O95983 291 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 IGLV3-27P01718 113 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 PNMA6AP0CW24 399 aaPredicted RBP20.58■□□□□ 0.89
SMC4-222ENST00000490207 GBP1P32455 592 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 TBX4P57082 545 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 RAPGEF1Q13905 1077 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 ELF2Q15723 593 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 MPPE1Q53F39 396 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 NUGGCQ68CJ6 796 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 SASS6Q6UVJ0 657 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 ANKS1BQ7Z6G8 1248 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 C11orf74Q86VG3 221 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 PASD1Q8IV76 773 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 UNC45BQ8IWX7 931 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 CHPFQ8IZ52 775 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 RMDN1Q96DB5 314 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 SERPINB11Q96P15 392 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 ACOX2Q99424 681 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 LSM14BQ9BX40 385 aaKnown RBP20.58■□□□□ 0.89
SMC4-222ENST00000490207 DUSP15Q9H1R2 295 aaPredicted RBP20.58■□□□□ 0.89
SMC4-222ENST00000490207 SEMA4GQ9NTN9 838 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 PCDHGC3Q9UN70 934 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 INVSQ9Y283 1065 aa20.58■□□□□ 0.89
SMC4-222ENST00000490207 THADAQ6YHU6 1953 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 TSPAN3O60637 253 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 FYNP06241 537 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 HOXD9P28356 352 aaPredicted RBP20.57■□□□□ 0.88
SMC4-222ENST00000490207 RING1Q06587 406 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 KCNMA1Q12791 1236 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 GEN1Q17RS7 908 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 SDE2Q6IQ49 451 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 DPY19L2P1Q6NXN4 242 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 TMEM110Q86TL2 294 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 OLIG1Q8TAK6 271 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 SPACA7Q96KW9 195 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 ARRDC1-AS1Q9H2J1 176 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 ANO10Q9NW15 660 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 NAALADL1Q9UQQ1 740 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 FHOD1Q9Y613 1164 aa20.57■□□□□ 0.88
SMC4-222ENST00000490207 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.57■□□□□ 0.88
SMC4-222ENST00000490207 FOXN3O00409 490 aaPredicted RBP20.56■□□□□ 0.88
SMC4-222ENST00000490207 CAPN9O14815 690 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 RHOBTB1O94844 696 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 CLCN1P35523 988 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 SLC11A2P49281 568 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 NNTQ13423 1086 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 CSRP2Q16527 193 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 STX1AQ16623 288 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 CCDC183Q5T5S1 534 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 ADGRF1Q5T601 910 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 CDKAL1Q5VV42 579 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 PRR23CQ6ZRP0 262 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 C11orf57Q6ZUT1 292 aaPredicted RBP20.56■□□□□ 0.88
SMC4-222ENST00000490207 BEND5Q7L4P6 421 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 TAC4Q86UU9 113 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 SLC47A2Q86VL8 602 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 FAM71AQ8IYT1 594 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 PGBD3Q8N328 593 aa20.56■□□□□ 0.88
SMC4-222ENST00000490207 C1orf131Q8NDD1 294 aaKnown RBP20.56■□□□□ 0.88
SMC4-222ENST00000490207 PIWIL1Q96J94 861 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms