RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 PCDHA7Q9UN72 937 aa12.36□□□□□ -0.43
FDPS-215ENST00000490140 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
FDPS-215ENST00000490140 BCAT2O15382 392 aaPredicted RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 FLRT2O43155 660 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 SH3BP5O60239 455 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 CILPO75339 1184 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 GJB3O75712 270 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 CISD3P0C7P0 127 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 CD58P19256 250 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 GTF2H1P32780 548 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 MATKP42679 507 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 TPMTP51580 245 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 PDE4CQ08493 712 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 EFEMP1Q12805 493 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 ENPP2Q13822 863 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 ACAP1Q15027 740 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 TEAD4Q15561 434 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 NFIL3Q16649 462 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 FYB2Q5VWT5 728 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 GLRX5Q86SX6 157 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 PROSER1Q86XN7 944 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 TMPRSS6Q8IU80 811 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 CPXM2Q8N436 756 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 ZCCHC9Q8N567 271 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 ZNF557Q8N988 423 aaPredicted RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 PAGE5Q96GU1 130 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 NMUR1Q9HB89 426 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 ELOVL2Q9NXB9 296 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 MARCH2Q9P0N8 246 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
FDPS-215ENST00000490140 HCN2Q9UL51 889 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
FDPS-215ENST00000490140 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 CKAP5Q14008 2032 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 MDM4O15151 490 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 KLRC4O43908 158 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 IGLV3-19P01714 112 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 EPHX1P07099 455 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 IL12RB1P42701 662 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 GCLMP48507 274 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 PGFP49763 221 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 AFF3P51826 1226 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 RING1Q06587 406 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 KRT39Q6A163 491 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 DENND1CQ8IV53 801 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 GRAMD1CQ8IYS0 662 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 SETD7Q8WTS6 366 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 DDI1Q8WTU0 396 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 RNF139Q8WU17 664 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 HEXIM2Q96MH2 286 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 MKRN2Q9H000 416 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 SLC6A17Q9H1V8 727 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 CCDC86Q9H6F5 360 aaKnown RBP12.34□□□□□ -0.43
FDPS-215ENST00000490140 GAREM1Q9H706 876 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 NUDT5Q9UKK9 219 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 PLA2G4CQ9UP65 541 aa12.34□□□□□ -0.43
FDPS-215ENST00000490140 NBEAQ8NFP9 2946 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 METTL12A8MUP2 240 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 WASH3PC4AMC7 463 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 LATS1O95835 1130 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 HMBSP08397 361 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 MXI1P50539 228 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 BCAT1P54687 386 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.44
FDPS-215ENST00000490140 ZBTB16Q05516 673 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 COL9A2Q14055 689 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 ZNF234Q14588 700 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 GEN1Q17RS7 908 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 PPP1R26Q5T8A7 1209 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 GALNT15Q8N3T1 639 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 FBXL13Q8NEE6 735 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 SNX19Q92543 992 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 SNX21Q969T3 373 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms