RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ASTE1Q2TB18 679 aaPredicted RBP11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SLC25A52Q3SY17 297 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SLC44A4Q53GD3 710 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 DCUN1D2Q6PH85 259 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 Q6ZNB5 142 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SND1Q7KZF4 910 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS13D-210ENST00000489961 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 EMC1Q8N766 993 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 RXFP2Q8WXD0 754 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 RNF34Q969K3 372 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 MSANTD3Q96H12 275 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SHDQ96IW2 340 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
VPS13D-210ENST00000489961 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 MRPL47Q9HD33 250 aaKnown RBP11.32□□□□□ -0.6
VPS13D-210ENST00000489961 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 HEBP1Q9NRV9 189 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS13D-210ENST00000489961 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 COX16Q9P0S2 106 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 MYO1AQ9UBC5 1043 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 SCINQ9Y6U3 715 aa11.32□□□□□ -0.6
VPS13D-210ENST00000489961 TCRBV5S1A1TA0A578 114 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 C2CD4BA6NLJ0 364 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 GJB6O95452 261 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 ADH1CP00326 375 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 KLKB1P03952 638 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 GPD1P21695 349 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 CCR1P32246 355 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 CYLC1P35663 651 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 MRE11P49959 708 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 GSDMDP57764 484 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 MTA1Q13330 715 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 MAMLD1Q13495 774 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 PLEKHA7Q6IQ23 1121 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 TRNP1Q6NT89 227 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 C1orf228Q6PIY5 440 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 TPRG1Q6ZUI0 275 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 ADGRG2Q8IZP9 1017 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 SIX5Q8N196 739 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 ATP6V0D2Q8N8Y2 350 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 JOSD2Q8TAC2 188 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 EXOC4Q96A65 974 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 AZIN2Q96A70 460 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 PGAP3Q96FM1 320 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 SLC39A13Q96H72 371 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 FCRL2Q96LA5 508 aaPredicted RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 MCEEQ96PE7 176 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 TBCBQ99426 244 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 AGO1Q9UL18 857 aaKnown RBP11.31□□□□□ -0.6
VPS13D-210ENST00000489961 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 PIAS3Q9Y6X2 628 aa11.31□□□□□ -0.6
VPS13D-210ENST00000489961 NCOR1O75376 2440 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 TMEM221A6NGB7 291 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 SPECC1L-ADORA2AF8WAN1 911 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 M0R296 226 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 DLL1O00548 723 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 MAN2B1O00754 1011 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 ACSL4O60488 711 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 MOCS2O96007 188 aaPredicted RBP11.3□□□□□ -0.6
VPS13D-210ENST00000489961 CYBBP04839 570 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 CYP17A1P05093 508 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 ADH5P11766 374 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 FECHP22830 423 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
VPS13D-210ENST00000489961 PTPN9P43378 593 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 GALCP54803 685 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 ATP11AP98196 1134 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 GAD2Q05329 585 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 EIF4EBP2Q13542 120 aaPredicted RBP11.3□□□□□ -0.6
VPS13D-210ENST00000489961 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 DHCR24Q15392 516 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 CDO1Q16878 200 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 CCDC14Q49A88 953 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 ZC3H12AQ5D1E8 599 aaKnown RBP11.3□□□□□ -0.6
VPS13D-210ENST00000489961 BRMS1LQ5PSV4 323 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 LY6G5CQ5SRR4 150 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 C10orf76Q5T2E6 689 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 ADGRF1Q5T601 910 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
VPS13D-210ENST00000489961 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms