RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ARAP1Q96P48 1450 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 PRXQ9BXM0 1461 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ARHGEF17Q96PE2 2063 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 A0A1W2PPL8 197 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 PI4KAP2A4QPH2 592 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ADM5C9JUS6 153 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 F2RL2O00254 374 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 PODXLO00592 558 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SPTLC2O15270 562 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ZBED4O75132 1171 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 PTP4A3O75365 173 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 FAM155BO75949 473 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 HSPA4LO95757 839 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TUBB4AP04350 444 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 HNRNPA1P09651 372 aaKnown RBP eCLIP3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 IL1R1P14778 569 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 MALP21145 153 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ACSL1P33121 698 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 GRIA3P42263 894 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SNAPC2Q13487 334 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 FGL2Q14314 439 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 CFAP58Q5T655 872 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TSTD2Q5T7W7 516 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TTLL5Q6EMB2 1281 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TAPT1Q6NXT6 567 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 MFSD6Q6ZSS7 791 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TMPRSS9Q7Z410 1059 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 HEATR3Q7Z4Q2 680 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TCP11L2Q8N4U5 519 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ARL10Q8N8L6 244 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 CCDC191Q8NCU4 936 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 Q8NFD4 153 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SCAMP5Q8TAC9 235 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 FAM71BQ8TC56 605 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SPPL3Q8TCT6 385 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ST8SIA4Q92187 359 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SNX19Q92543 992 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 LRRC46Q96FV0 321 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 LTV1Q96GA3 475 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 UROC1Q96N76 676 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 TRIB1Q96RU8 372 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SLF1Q9BQI6 1058 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 GPATCH1Q9BRR8 931 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 CPNE5Q9HCH3 593 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SACM1LQ9NTJ5 587 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 MRPS18AQ9NVS2 196 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 HAUS2Q9NVX0 235 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ABCF2Q9UG63 623 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 SLC13A4Q9UKG4 626 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ARHGAP26Q9UNA1 814 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 ST3GAL5Q9UNP4 418 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 PCDHA1Q9Y5I3 950 aa3.55□□□□□ -1.84
DEPDC1-204ENST00000489862 RAPGEF2Q9Y4G8 1499 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 HMX3A6NHT5 357 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 VWC2LB2RUY7 222 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 TMEM233B4DJY2 109 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 DKC1O60832 514 aaKnown RBP eCLIP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PROP1O75360 226 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 SGPL1O95470 568 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 AHSGP02765 367 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 MYL4P12829 197 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PORP16435 677 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 XBP1P17861 261 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 GABRB3P28472 473 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 SNX16P57768 344 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PROK1P58294 105 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PSMC1P62191 440 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 KRT83P78385 493 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 IFI35P80217 286 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PIGFQ07326 219 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PTPRRQ15256 657 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 TXNRD1Q16881 649 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 HECTD3Q5T447 861 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 B4GALNT4Q76KP1 1039 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 RASGRP2Q7LDG7 609 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 ZMIZ2Q8NF64 920 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 MGARPQ8TDB4 240 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 RFFLQ8WZ73 363 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 PGBD1Q96JS3 809 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 COG8Q96MW5 612 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 TIMP4Q99727 224 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 TREX2Q9BQ50 279 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 MXD3Q9BW11 206 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 SIL1Q9H173 461 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 ACAD9Q9H845 621 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 LMBRD1Q9NUN5 540 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 LPAR3Q9UBY5 353 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 ADD3Q9UEY8 706 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 TBC1D30Q9Y2I9 924 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 ENTPD2Q9Y5L3 495 aa3.54□□□□□ -1.84
DEPDC1-204ENST00000489862 SHROOM2Q13796 1616 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 CCDC151A5D8V7 595 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TRIM64A6NGJ6 449 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TRIM64BA6NI03 449 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 PRSS29PA6NIE9 313 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 LINC00473A8K010 186 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 NT5C1B-RDH14C9J2C7 533 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ALADP13716 330 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TYRP14679 529 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms