RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 C11orf74Q86VG3 221 aa18.6■□□□□ 0.57
ABCF3-217ENST00000489719 CHPFQ8IZ52 775 aa18.6■□□□□ 0.57
ABCF3-217ENST00000489719 TMA16Q96EY4 203 aaKnown RBP18.6■□□□□ 0.57
ABCF3-217ENST00000489719 ZC3H10Q96K80 434 aaKnown RBP18.6■□□□□ 0.57
ABCF3-217ENST00000489719 TPSD1Q9BZJ3 242 aa18.6■□□□□ 0.57
ABCF3-217ENST00000489719 SIX2Q9NPC8 291 aa18.6■□□□□ 0.57
ABCF3-217ENST00000489719 INVSQ9Y283 1065 aa18.6■□□□□ 0.57
ABCF3-217ENST00000489719 PRR5-ARHGAP8B1AHC4 643 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 PRRT4C9JH25 899 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 DCLK1O15075 740 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 MSI1O43347 362 aaKnown RBP18.59■□□□□ 0.57
ABCF3-217ENST00000489719 TSPAN3O60637 253 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 LATS1O95835 1130 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 MBD3O95983 291 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SDHBP21912 280 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 GBP1P32455 592 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 WASP42768 502 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SLC11A2P49281 568 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 TBX4P57082 545 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SNX16P57768 344 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 ZNF445P59923 1031 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 ARHGAP8P85298 464 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 BYSLQ13895 437 aaKnown RBP18.59■□□□□ 0.57
ABCF3-217ENST00000489719 E2F5Q15329 346 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 NUGGCQ68CJ6 796 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 RASSF3Q86WH2 238 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 UCMAQ8WVF2 138 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 NOX5Q96PH1 765 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SLC2A11Q9BYW1 496 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SEMA4GQ9NTN9 838 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 ANO10Q9NW15 660 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 SLC27A6Q9Y2P4 619 aa18.59■□□□□ 0.57
ABCF3-217ENST00000489719 WDR87Q6ZQQ6 2873 aa18.58■□□□□ 0.57
ABCF3-217ENST00000489719 FANCMQ8IYD8 2048 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 GPR179Q6PRD1 2367 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 TCRBV21S2A2A0A5A6 115 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 HOXB2P14652 356 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 HNRNPLP14866 589 aaKnown RBP eCLIP18.58■□□□□ 0.56
ABCF3-217ENST00000489719 TGM1P22735 817 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 LMNB2Q03252 620 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 RAPGEF1Q13905 1077 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 PLK5Q496M5 336 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 KLHDC7AQ5VTJ3 777 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 EGFLAMQ63HQ2 1017 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
ABCF3-217ENST00000489719 FAM217AQ8IXS0 508 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 HMGB4Q8WW32 186 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 DDX50Q9BQ39 737 aaKnown RBP18.58■□□□□ 0.56
ABCF3-217ENST00000489719 LHX5Q9H2C1 402 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 ARRDC1-AS1Q9H2J1 176 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 PARD6AQ9NPB6 346 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 STOML2Q9UJZ1 356 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 NAALADL1Q9UQQ1 740 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 CEP83Q9Y592 693 aa18.58■□□□□ 0.56
ABCF3-217ENST00000489719 E5RJQ4 531 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 MAP3K13O43283 966 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 TIMM44O43615 452 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 FOXD2O60548 495 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 FYNP06241 537 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 CHRM1P11229 460 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 CLCN1P35523 988 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 YWHAZP63104 245 aaKnown RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 RING1Q06587 406 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 KCNMA1Q12791 1236 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 PDCLQ13371 301 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 DRAP1Q14919 205 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 CSRP2Q16527 193 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 BEND5Q7L4P6 421 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 AZIN2Q96A70 460 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 P2RY11Q96G91 374 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 PPP1R13BQ96KQ4 1090 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 SERPINB11Q96P15 392 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 ACOX2Q99424 681 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 DUSP15Q9H1R2 295 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-217ENST00000489719 VPS16Q9H269 839 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 POPDC2Q9HBU9 364 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 TAB2Q9NYJ8 693 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 CYTH4Q9UIA0 394 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 HCN2Q9UL51 889 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 PCDHGC3Q9UN70 934 aa18.57■□□□□ 0.56
ABCF3-217ENST00000489719 ATG2BQ96BY7 2078 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 GFRA2O00451 464 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 NPC1O15118 1278 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 ACSL4O60488 711 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 ARID5AQ03989 594 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 RSPO4Q2I0M5 234 aaPredicted RBP18.56■□□□□ 0.56
ABCF3-217ENST00000489719 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 ANKS1BQ7Z6G8 1248 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 SLC47A2Q86VL8 602 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 PASD1Q8IV76 773 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 FAM71AQ8IYT1 594 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 WDTC1Q8N5D0 677 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 ANKRD20A12PQ8NF67 263 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 DQX1Q8TE96 717 aaKnown RBP18.56■□□□□ 0.56
ABCF3-217ENST00000489719 RMDN1Q96DB5 314 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 SPACA7Q96KW9 195 aa18.56■□□□□ 0.56
ABCF3-217ENST00000489719 LSM14BQ9BX40 385 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms