RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SLC11A2P49281 568 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 UBASH3AP57075 661 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 ZNF445P59923 1031 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 CDK17Q00537 523 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 TAF5Q15542 800 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 ADGRF1Q5T601 910 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 LRSAM1Q6UWE0 723 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 OLFML1Q6UWY5 402 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 FAM183BPQ6ZVS7 135 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 SLC26A9Q7LBE3 791 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 C12orf40Q86WS4 652 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 FAM217AQ8IXS0 508 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
MDC1-206ENST00000489540 SLC20A1Q8WUM9 679 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 SLC2A13Q96QE2 648 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 FAM126AQ9BYI3 521 aaPredicted RBP18.07■□□□□ 0.48
MDC1-206ENST00000489540 EDEM3Q9BZQ6 932 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 TSPY26PQ9H489 355 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 HELZP42694 1942 aaKnown RBP18.07■□□□□ 0.48
MDC1-206ENST00000489540 K7EQS6 105 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 PAPSS2O95340 614 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 PENKP01210 267 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 CYP1A1P04798 512 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 CHRNB2P17787 502 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 SCNN1AP37088 669 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 PLA2G5P39877 138 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 NOMO3P69849 1222 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 FMO1Q01740 532 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 ARID5AQ03989 594 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 DCAF6Q58WW2 860 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 NAA35Q5VZE5 725 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 DEFB106AQ8N104 65 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 CPA5Q8WXQ8 436 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 EZH1Q92800 747 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 IRX2Q9BZI1 471 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 CACNA1HO95180 2353 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 MYO16Q9Y6X6 1858 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 TBC1D3BA6NDS4 549 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 TRUB2O95900 331 aaKnown RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 GBP1P32455 592 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 NRLP54845 237 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 MRPS21P82921 87 aaKnown RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 SATB1Q01826 763 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 GRAMD4Q6IC98 578 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 TAC4Q86UU9 113 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 BAP1Q92560 729 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 SLC39A13Q96H72 371 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 PIWIL1Q96J94 861 aaKnown RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 FCRL2Q96LA5 508 aaPredicted RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 DDX50Q9BQ39 737 aaKnown RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 DNAJC17Q9NVM6 304 aaKnown RBP18.06■□□□□ 0.48
MDC1-206ENST00000489540 TMEM51Q9NW97 253 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 RRN3Q9NYV6 651 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 FBXO10Q9UK96 956 aa18.06■□□□□ 0.48
MDC1-206ENST00000489540 GRAP2O75791 330 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 IGLV3-25P01717 112 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 NOS2P35228 1153 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 MPPE1Q53F39 396 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 FIGNQ5HY92 759 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 FYB2Q5VWT5 728 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 ZC3H14Q6PJT7 736 aaKnown RBP18.05■□□□□ 0.48
MDC1-206ENST00000489540 XYLT1Q86Y38 959 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 PHTF2Q8N3S3 785 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 RPLP0P6Q8NHW5 317 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 ADAM32Q8TC27 787 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 KCNV2Q8TDN2 545 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 USP33Q8TEY7 942 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 DDI1Q8WTU0 396 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 ACDQ96AP0 544 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 TMA16Q96EY4 203 aaKnown RBP18.05■□□□□ 0.48
MDC1-206ENST00000489540 AGPAT1Q99943 283 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 PLK2Q9NYY3 685 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 SLC12A6Q9UHW9 1150 aa18.05■□□□□ 0.48
MDC1-206ENST00000489540 IRAK2O43187 625 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 ACSL4O60488 711 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 DAB1O75553 588 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 APOEP02649 317 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 SLC2A3P11169 496 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 MMP8P22894 467 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 HOXA6P31267 233 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 NBL1P41271 181 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 MATKP42679 507 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 KDSRQ06136 332 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 EIF4EBP2Q13542 120 aaPredicted RBP18.04■□□□□ 0.48
MDC1-206ENST00000489540 HSF5Q4G112 596 aaPredicted RBP18.04■□□□□ 0.48
MDC1-206ENST00000489540 IRF2BP2Q7Z5L9 587 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 TERB1Q8NA31 727 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 NELL1Q92832 810 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 BHMTQ93088 406 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 IQCDQ96DY2 449 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 SLC2A11Q9BYW1 496 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 FAM86C1Q9NVL1 165 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.04■□□□□ 0.48
MDC1-206ENST00000489540 ZSCAN32Q9NX65 697 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 AIPL1Q9NZN9 384 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 SLC8A2Q9UPR5 921 aa18.04■□□□□ 0.48
MDC1-206ENST00000489540 GFRA2O00451 464 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 TPM3P06753 285 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 CISD3P0C7P0 127 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms