RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ITIH6Q6UXX5 1313 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 E7EVH7 732 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 CBFA2T3O75081 653 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 KRT38O76015 456 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 ONECUT2O95948 504 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 ZNF37AP17032 561 aaPredicted RBP4.88□□□□□ -1.63
XRN1-213ENST00000489241 ADORA2AP29274 412 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 HTR7P34969 479 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 KRT9P35527 623 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 PLA2G5P39877 138 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 MPLP40238 635 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 GATMP50440 423 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 VAMP2P63027 116 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 TIAL1Q01085 375 aaKnown RBP eCLIP4.88□□□□□ -1.63
XRN1-213ENST00000489241 CHRNDQ07001 517 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 MAPK7Q13164 816 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 COLEC12Q5KU26 742 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 IZUMO1Q8IYV9 350 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 ABRAQ8N0Z2 381 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 CEP70Q8NHQ1 597 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 WDR60Q8WVS4 1066 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 ATG4AQ8WYN0 398 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 HDAC2Q92769 488 aaKnown RBP4.88□□□□□ -1.63
XRN1-213ENST00000489241 C3orf49Q96BT1 292 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 PBKQ96KB5 322 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 BRD8Q9H0E9 1235 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 USP22Q9UPT9 525 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 SNX14Q9Y5W7 946 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 ADGRA2Q96PE1 1338 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 COL15A1P39059 1388 aa4.88□□□□□ -1.63
XRN1-213ENST00000489241 RNASEH2AO75792 299 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 RPP40O75818 363 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 BAIAP3O94812 1187 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 CER1O95813 267 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 TBX18O95935 607 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 RBL1P28749 1068 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 EPHA3P29320 983 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 GRIA3P42263 894 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 ELLP55199 621 aaPredicted RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 EIF2B5Q13144 721 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 SMAD1Q15797 465 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 DEPDC1Q5TB30 811 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 MAP3K21Q5TCX8 1036 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 ZKSCAN2Q63HK3 967 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 BBS12Q6ZW61 710 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 RAB11FIP4Q86YS3 637 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 TMEM57Q8N5G2 664 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 BOLLQ8N9W6 283 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 FAM98AQ8NCA5 519 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 CAGE1Q8TC20 777 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 ACTRT2Q8TDY3 377 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 TFAP2BQ92481 460 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 GOLGA1Q92805 767 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 HVCN1Q96D96 273 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 RRP36Q96EU6 259 aaKnown RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 MCRS1Q96EZ8 462 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 INO80BQ9C086 356 aaPredicted RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 KCND3Q9UK17 655 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 FBXO2Q9UK22 296 aaPredicted RBP4.87□□□□□ -1.63
XRN1-213ENST00000489241 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 RIMKLBQ9ULI2 386 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 SH2B3Q9UQQ2 575 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 SLC27A6Q9Y2P4 619 aa4.87□□□□□ -1.63
XRN1-213ENST00000489241 A1L4Q6 167 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 EFCAB8A8MWE9 144 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 KIF28PB7ZC32 967 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 PSMD9O00233 223 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 TTLL1O95922 423 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 C1RP00736 705 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 RHOP08100 348 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 CNPP09543 421 aaKnown RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 NR2F6P10588 404 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 YY1P25490 414 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 SERPINA4P29622 427 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 LIPAP38571 399 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 MTHFSP49914 203 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 CDK7P50613 346 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 ATXN1P54253 815 aaKnown RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 SP2Q02086 613 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 HNRNPA0Q13151 305 aaKnown RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 RPS6KA2Q15349 733 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 TXNRD1Q16881 649 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 LY6KQ17RY6 165 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 GALNTL6Q49A17 601 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 GPATCH4Q5T3I0 446 aaKnown RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 MZT2BQ6NZ67 158 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 MSANTD2Q6P1R3 559 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 CLEC9AQ6UXN8 241 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 SYT13Q7L8C5 426 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
XRN1-213ENST00000489241 TRABD2AQ86V40 505 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 TTC30AQ86WT1 665 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 CPT1BQ92523 772 aa4.86□□□□□ -1.63
XRN1-213ENST00000489241 GLG1Q92896 1179 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms