RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 LIMA1Q9UHB6 759 aaKnown RBP25.03■■□□□ 1.6
PTPN18-213ENST00000489215 GMEB2Q9UKD1 530 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 SLC27A6Q9Y2P4 619 aa25.03■■□□□ 1.6
PTPN18-213ENST00000489215 FAM186AA6NE01 2351 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 RIF1Q5UIP0 2472 aaKnown RBP25.02■■□□□ 1.6
PTPN18-213ENST00000489215 LRRC10BA6NIK2 292 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 E5RJQ4 531 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 AXIN1O15169 862 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 HRO43593 1189 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 TBX4P57082 545 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 TYRO3Q06418 890 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 DMWDQ09019 674 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 CEP68Q76N32 757 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 SLC47A2Q86VL8 602 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 ZNF513Q8N8E2 541 aaPredicted RBP25.02■■□□□ 1.6
PTPN18-213ENST00000489215 DDI1Q8WTU0 396 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 GAB3Q8WWW8 586 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 NAA15Q9BXJ9 866 aaKnown RBP25.02■■□□□ 1.6
PTPN18-213ENST00000489215 ASNSD1Q9NWL6 643 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 TMEM63CQ9P1W3 806 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 TLR6Q9Y2C9 796 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 FHOD1Q9Y613 1164 aa25.02■■□□□ 1.6
PTPN18-213ENST00000489215 PTPRZ1P23471 2315 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 SMTNL1A8MU46 457 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 NPC1O15118 1278 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 IRAK2O43187 625 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 PAPSS1O43252 624 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 KLF8O95600 359 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 IGLV3-27P01718 113 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 FYB2Q5VWT5 728 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 PRR23BQ6ZRT6 265 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 C11orf74Q86VG3 221 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 ZDHHC17Q8IUH5 632 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 CCDC33Q8N5R6 958 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 ALLCQ8N6M5 410 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 ZNF557Q8N988 423 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 TXNDC5Q8NBS9 432 aaKnown RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 TMEM35BQ8NCS4 154 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 IPO4Q8TEX9 1081 aaKnown RBP25.01■■□□□ 1.59
PTPN18-213ENST00000489215 HHIPQ96QV1 700 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 BPIFA3Q9BQP9 254 aa25.01■■□□□ 1.59
PTPN18-213ENST00000489215 ZBTB24O43167 697 aaPredicted RBP25■■□□□ 1.59
PTPN18-213ENST00000489215 RPP40O75818 363 aaKnown RBP25■■□□□ 1.59
PTPN18-213ENST00000489215 CISD3P0C7P0 127 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 COPB1P53618 953 aaKnown RBP25■■□□□ 1.59
PTPN18-213ENST00000489215 MESP2Q0VG99 397 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 TOGARAM2Q6ZUX3 1019 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 UCMAQ8WVF2 138 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 TMA16Q96EY4 203 aaKnown RBP25■■□□□ 1.59
PTPN18-213ENST00000489215 SYNCQ9H7C4 482 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 TMEM51Q9NW97 253 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 PLK2Q9NYY3 685 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 CYTH4Q9UIA0 394 aa25■■□□□ 1.59
PTPN18-213ENST00000489215 AJAP1Q9UKB5 411 aaPredicted RBP25■■□□□ 1.59
PTPN18-213ENST00000489215 MYO15AQ9UKN7 3530 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 FYNP06241 537 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 CYP11B1P15538 503 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 NTSR1P30989 418 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 MTA1Q13330 715 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 USP39Q53GS9 565 aaKnown RBP24.99■■□□□ 1.59
PTPN18-213ENST00000489215 MPP7Q5T2T1 576 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 EMC10Q5UCC4 262 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 CAVIN1Q6NZI2 390 aaKnown RBP24.99■■□□□ 1.59
PTPN18-213ENST00000489215 CACNA2D4Q7Z3S7 1137 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 ZNF677Q86XU0 584 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 WDTC1Q8N5D0 677 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 MSANTD4Q8NCY6 345 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 C1orf131Q8NDD1 294 aaKnown RBP24.99■■□□□ 1.59
PTPN18-213ENST00000489215 DQX1Q8TE96 717 aaKnown RBP24.99■■□□□ 1.59
PTPN18-213ENST00000489215 BHMTQ93088 406 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 NAALADL1Q9UQQ1 740 aa24.99■■□□□ 1.59
PTPN18-213ENST00000489215 USP34Q70CQ2 3546 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 VPS13AQ96RL7 3174 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 F8VZ95 297 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 GFRA2O00451 464 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 MSI1O43347 362 aaKnown RBP24.98■■□□□ 1.59
PTPN18-213ENST00000489215 TIMM44O43615 452 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 HSF2BPO75031 334 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 RETP07949 1114 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 GBP1P32455 592 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 PXNP49023 591 aaPredicted RBP24.98■■□□□ 1.59
PTPN18-213ENST00000489215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.98■■□□□ 1.59
PTPN18-213ENST00000489215 RASSF3Q86WH2 238 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 PASD1Q8IV76 773 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 LOXL4Q96JB6 756 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 CPXM1Q96SM3 734 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 SLC12A6Q9UHW9 1150 aa24.98■■□□□ 1.59
PTPN18-213ENST00000489215 MYO18AQ92614 2054 aaKnown RBP24.98■■□□□ 1.59
PTPN18-213ENST00000489215 TYW5A2RUC4 315 aaKnown RBP24.97■■□□□ 1.59
PTPN18-213ENST00000489215 LGALS16A8MUM7 142 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 SGK1O00141 431 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 ACSL4O60488 711 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 LRP3O75074 770 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 LSM8O95777 96 aaKnown RBP24.97■■□□□ 1.59
PTPN18-213ENST00000489215 SLC2A3P11169 496 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 HNRNPLP14866 589 aaKnown RBP eCLIP24.97■■□□□ 1.59
PTPN18-213ENST00000489215 ZNF18P17022 549 aa24.97■■□□□ 1.59
PTPN18-213ENST00000489215 CDH5P33151 784 aaPredicted RBP24.97■■□□□ 1.59
PTPN18-213ENST00000489215 BYSLQ13895 437 aaKnown RBP24.97■■□□□ 1.59
PTPN18-213ENST00000489215 EIF4HQ15056 248 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms