RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 IRAK2O43187 625 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 MSI1O43347 362 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 CACNG3O60359 315 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 TSPAN3O60637 253 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 HSF2BPO75031 334 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 RPP40O75818 363 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 MOCS2O96007 188 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 KCNA4P22459 653 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 HOXA6P31267 233 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 MTA1Q13330 715 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 GAS6Q14393 721 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 STARD3Q14849 445 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ELF2Q15723 593 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 KLHL40Q2TBA0 621 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 MSANTD2Q6P1R3 559 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 Q6ZNB5 142 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 TMEM110Q86TL2 294 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 WDR5BQ86VZ2 330 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 CPXM2Q8N436 756 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ALLCQ8N6M5 410 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 TXNDC5Q8NBS9 432 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 CLEC4CQ8WTT0 213 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 SLC2A11Q9BYW1 496 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 SIX2Q9NPC8 291 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 COX16Q9P0S2 106 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 STAP1Q9ULZ2 295 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 MMP17Q9ULZ9 603 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 PLA2G4CQ9UP65 541 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 COL4A3Q01955 1670 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 OBSL1O75147 1896 aa11.67□□□□□ -0.54
ARHGEF39-204ENST00000488918 GREB1Q4ZG55 1949 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 DENND4CQ5VZ89 1909 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 MYO16Q9Y6X6 1858 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 F8VZ95 297 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 SYNCRIPO60506 623 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 GFPT2O94808 682 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 RHOBTB1O94844 696 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 LSM8O95777 96 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 CAVIN2O95810 425 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 GLI1P08151 1106 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 CYP11B1P15538 503 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 NTSR1P30989 418 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 CLCN1P35523 988 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 SOX5P35711 763 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 PXNP49023 591 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 RING1Q06587 406 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 NNTQ13423 1086 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 LPAL2Q16609 132 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 LAIR1Q6GTX8 287 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 ANO7Q6IWH7 933 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 ANKS1BQ7Z6G8 1248 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 C12orf40Q86WS4 652 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 ZNF677Q86XU0 584 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 WBP2Q969T9 261 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 BPIFA3Q9BQP9 254 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 TMEM51Q9NW97 253 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 DDIT4Q9NX09 232 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 NAALADL1Q9UQQ1 740 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 MUC6Q6W4X9 2439 aa11.66□□□□□ -0.54
ARHGEF39-204ENST00000488918 TCRBV21S2A2A0A5A6 115 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 SYCE3A1L190 88 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 ANKRD62A6NC57 917 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 K7ESF4 209 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 NPC1O15118 1278 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 TIMM44O43615 452 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 ACSL4O60488 711 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 MOCS3O95396 460 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 KLKB1P03952 638 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 TPM3P06753 285 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 PNMA6AP0CW24 399 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 HOXB2P14652 356 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 CCR1P32246 355 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 NME3Q13232 169 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 CDH18Q13634 790 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 CRY1Q16526 586 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 FAM102AQ5T9C2 384 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 BEND5Q7L4P6 421 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 ETFBKMTQ8IXQ9 262 aa11.65□□□□□ -0.54
ARHGEF39-204ENST00000488918 HJURPQ8NCD3 748 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms