RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MLXIPLQ9NP71 852 aa5.56□□□□□ -1.52
PTPN4-212ENST00000488896 STARD7Q9NQZ5 370 aa5.56□□□□□ -1.52
PTPN4-212ENST00000488896 HEY2Q9UBP5 337 aa5.56□□□□□ -1.52
PTPN4-212ENST00000488896 SPATA31A1Q5TZJ5 1347 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 FAM234BA2RU67 622 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 KCNQ3O43525 872 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 CD63P08962 238 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 ST6GAL1P15907 406 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 HSF1Q00613 529 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 USP17L6PQ6QN14 398 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 GLIS1Q8NBF1 620 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 ZNF548Q8NEK5 533 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-212ENST00000488896 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 AGO4Q9HCK5 861 aaKnown RBP5.55□□□□□ -1.52
PTPN4-212ENST00000488896 SEMA5BQ9P283 1151 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 CEP83Q9Y592 693 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
PTPN4-212ENST00000488896 CCDC187A0A096LP49 1063 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 C2CD4BA6NLJ0 364 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 TTC34A8MYJ7 566 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 VIPP01282 170 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 TMEM191BP0C7N4 346 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 DUSP1P28562 367 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 THBS4P35443 961 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 IDUAP35475 653 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 POLGP54098 1239 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-212ENST00000488896 ATP1A4Q13733 1029 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 LAMB3Q13751 1172 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 FAM90A2PQ658T7 463 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 CCDC144NLQ6NUI1 221 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 FBXO38Q6PIJ6 1188 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 C9orf106Q8NAJ2 232 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 RIPOR3Q96MK2 946 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 TMEM45AQ9NWC5 275 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 RGL1Q9NZL6 768 aa5.54□□□□□ -1.52
PTPN4-212ENST00000488896 LY6G6EA0A0G2JKS1 128 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 PRYO14603 147 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 NBPF7P0C2Y1 421 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-212ENST00000488896 EGR1P18146 543 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 NDUFS1P28331 727 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 HOXA7P31268 230 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-212ENST00000488896 SLC5A2P31639 672 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 FHL1Q13642 323 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 SLC5A9Q2M3M2 681 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 SLC35G1Q2M3R5 365 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 EARS2Q5JPH6 523 aaKnown RBP5.53□□□□□ -1.52
PTPN4-212ENST00000488896 KYAT3Q6YP21 454 aaKnown RBP5.53□□□□□ -1.52
PTPN4-212ENST00000488896 KRT27Q7Z3Y8 459 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 IGFBPL1Q8WX77 278 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 CELF1Q92879 486 aaKnown RBP5.53□□□□□ -1.52
PTPN4-212ENST00000488896 ZNF566Q969W8 418 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 CCDC136Q96JN2 1154 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 POT1Q9NUX5 634 aa5.53□□□□□ -1.52
PTPN4-212ENST00000488896 MYMKA6NI61 221 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 H3BNX3 289 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 M0QZQ0 153 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 PODXLO00592 558 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 NTN1O95631 604 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 SCP2P22307 547 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 MMP8P22894 467 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 RPS6KB1P23443 525 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 GNALP38405 381 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 ME1P48163 572 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 AGTR2P50052 363 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 MTX1Q13505 466 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 TLDC1Q6P9B6 456 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 RBM44Q6ZP01 1051 aaKnown RBP5.52□□□□□ -1.53
PTPN4-212ENST00000488896 PIK3AP1Q6ZUJ8 805 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 UEVLDQ8IX04 471 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 ADGRF4Q8IZF3 695 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 CLASRPQ8N2M8 674 aaKnown RBP5.52□□□□□ -1.53
PTPN4-212ENST00000488896 SENP7Q9BQF6 1050 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 EPS8L2Q9H6S3 715 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-212ENST00000488896 HS3ST3B1Q9Y662 390 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 SQORQ9Y6N5 450 aa5.52□□□□□ -1.53
PTPN4-212ENST00000488896 J3KTA2 159 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 UGDHO60701 494 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 PSG1P11464 419 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 MATN1P21941 496 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
PTPN4-212ENST00000488896 SLC8A1P32418 973 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 HOXD12P35452 270 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 STAT6P42226 847 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 NSUN2Q08J23 767 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPN4-212ENST00000488896 MAPKAPK3Q16644 382 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 IL31Q6EBC2 164 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 ACSM6Q6P461 480 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 DHRS13Q6UX07 377 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 DEF8Q6ZN54 512 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 FAM57BQ71RH2 274 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 PIP4P1Q86T03 277 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 DPP9Q86TI2 863 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 RASGRP3Q8IV61 690 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 OR52L2PQ8NGH6 319 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 OVCA2Q8WZ82 227 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 WACQ9BTA9 647 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 ELOVL1Q9BW60 279 aa5.51□□□□□ -1.53
PTPN4-212ENST00000488896 RNF26Q9BY78 433 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms