RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PSTKQ8IV42 348 aaKnown RBP20.98■□□□□ 0.95
NECAB3-213ENST00000488489 SH2D3CQ8N5H7 860 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 FAM71DQ8N9W8 422 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 PCDH9Q9HC56 1237 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 ETNK2Q9NVF9 386 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 MFHAS1Q9Y4C4 1052 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 FAM169AQ9Y6X4 670 aa20.98■□□□□ 0.95
NECAB3-213ENST00000488489 OR6C75A6NL08 312 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 CSF2RAP15509 400 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 TGM2P21980 687 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 ADRA1BP35368 520 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 SLC10A2Q12908 348 aaPredicted RBP20.97■□□□□ 0.95
NECAB3-213ENST00000488489 MTMR3Q13615 1198 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 HIBCHQ6NVY1 386 aaPredicted RBP20.97■□□□□ 0.95
NECAB3-213ENST00000488489 CCHCR1Q8TD31 782 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 LRRN4Q8WUT4 740 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 SLC9A7Q96T83 725 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.97■□□□□ 0.957e-9■■□□□ 13.9
NECAB3-213ENST00000488489 PCDHB5Q9Y5E4 795 aa20.97■□□□□ 0.95
NECAB3-213ENST00000488489 VNN2O95498 520 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 EFEMP2O95967 443 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 AMPD1P23109 780 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 ALDH7A1P49419 539 aaKnown RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 GBE1Q04446 702 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 TTC19Q6DKK2 380 aaPredicted RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 VSTM1Q6UX27 236 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 SCD5Q86SK9 330 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 CCDC25Q86WR0 208 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 RSAD2Q8WXG1 361 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 TOP1MTQ969P6 601 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 VN1R3Q9BXE9 311 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 CRISPLD1Q9H336 500 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 PRDM5Q9NQX1 630 aaPredicted RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 FBXW11Q9UKB1 542 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 ATXN2Q99700 1313 aaKnown RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 FAM72CH0Y354 149 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 DNALI1O14645 258 aaPredicted RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 SOAT2O75908 522 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 TIMP1P01033 207 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 RFC2P35250 354 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 YWHAGP61981 247 aaKnown RBP eCLIP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 ELAVL2Q12926 359 aaKnown RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 FAM72AQ5TYM5 149 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 KCTD16Q68DU8 428 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 FAM72DQ6L9T8 149 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 PRSS55Q6UWB4 352 aaPredicted RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 TAC4Q86UU9 113 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 FAM72BQ86X60 149 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 C8orf48Q96LL4 319 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 TTPALQ9BTX7 342 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 PABPC3Q9H361 631 aaKnown RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 NMUR1Q9HB89 426 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 USP29Q9HBJ7 922 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 LRRC4CQ9HCJ2 640 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 DNAJC17Q9NVM6 304 aaKnown RBP20.96■□□□□ 0.95
NECAB3-213ENST00000488489 RRN3Q9NYV6 651 aa20.96■□□□□ 0.95
NECAB3-213ENST00000488489 RARGP13631 454 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 RPL22P35268 128 aaKnown RBP20.95■□□□□ 0.94
NECAB3-213ENST00000488489 USP46P62068 366 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 DEFB103AP81534 67 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 ROR1Q01973 937 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 CAV1Q03135 178 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 PKN2Q16513 984 aaKnown RBP20.95■□□□□ 0.94
NECAB3-213ENST00000488489 DARS2Q6PI48 645 aaKnown RBP20.95■□□□□ 0.94
NECAB3-213ENST00000488489 GPR152Q8TDT2 470 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 DQX1Q8TE96 717 aaKnown RBP20.95■□□□□ 0.94
NECAB3-213ENST00000488489 RNF139Q8WU17 664 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 NTAN1Q96AB6 310 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 ARHGEF4Q9NR80 690 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 SLC27A5Q9Y2P5 690 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 LTBP2Q14767 1821 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 CPB1P15086 417 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 ARL4AP40617 200 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 CXCR3P49682 368 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 GPR17Q13304 367 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 SPDYCQ5MJ68 293 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 NCBP2-AS2Q69YL0 99 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 FAM117BQ6P1L5 589 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 RNF19BQ6ZMZ0 732 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 CCDC33Q8N5R6 958 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 BBOF1Q8ND07 529 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 RABEP2Q9H5N1 569 aa20.95■□□□□ 0.94
NECAB3-213ENST00000488489 TPX2Q9ULW0 747 aaKnown RBP20.95■□□□□ 0.94
NECAB3-213ENST00000488489 MTMR11A4FU01 709 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 H7C0C1 242 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 CREB3O43889 395 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 MAGEA11P43364 429 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 ATP5OP48047 213 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 ATP1A2P50993 1020 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 ZNF844Q08AG5 666 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 SCAPQ12770 1279 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 EIF4EBP2Q13542 120 aaPredicted RBP20.94■□□□□ 0.94
NECAB3-213ENST00000488489 SLMAPQ14BN4 828 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 EFHC2Q5JST6 749 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 RNASEH2BQ5TBB1 312 aaKnown RBP20.94■□□□□ 0.94
NECAB3-213ENST00000488489 LRIG3Q6UXM1 1119 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 BEND5Q7L4P6 421 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 NUP93Q8N1F7 819 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 ATP6V1G3Q96LB4 118 aa20.94■□□□□ 0.94
NECAB3-213ENST00000488489 OSER1Q9NX31 292 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms