RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 C17orf53Q8N3J3 647 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CD101Q93033 1021 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 E2F7Q96AV8 911 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 RBM41Q96IZ5 413 aaKnown RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 PBKQ96KB5 322 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 BTBD6Q96KE9 485 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 C1orf74Q96LT6 269 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TRIM7Q9C029 511 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CARD9Q9H257 536 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 RETREG1Q9H6L5 497 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 KIF9Q9HAQ2 790 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 OSER1Q9NX31 292 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CLDND1Q9NY35 253 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 DNAI1Q9UI46 699 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 RASAL2Q9UJF2 1139 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ARHGAP26Q9UNA1 814 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 LAMA2P24043 3122 aaKnown RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 TADA3O75528 432 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 GLP2RO95838 553 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 FTCDO95954 541 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 MBL2P11226 248 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 TCF3P15923 654 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 ADRA1BP35368 520 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 PAPD7Q5XG87 772 aaKnown RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 MIB1Q86YT6 1006 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 CMTM8Q8IZV2 173 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 KCTD6Q8NC69 237 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 EXD1Q8NHP7 514 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 SHKBP1Q8TBC3 707 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 SLC39A13Q96H72 371 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 BTN2A3PQ96KV6 586 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 OSBPL2Q9H1P3 480 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 SLITRK6Q9H5Y7 841 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 CCSER2Q9H7U1 834 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 TRPC7Q9HCX4 862 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 PIGVQ9NUD9 493 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 RCOR3Q9P2K3 495 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-242ENST00000488013 EFR3BQ9Y2G0 817 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 HYOU1Q9Y4L1 999 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
HDLBP-242ENST00000488013 TNRC18O15417 2968 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 SLC9A3R1O14745 358 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 FOSL2P15408 326 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 PGFP49763 221 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 NRG1Q02297 640 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 SLC25A11Q02978 314 aaKnown RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 DPYSL2Q16555 572 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 TXNDC8Q6A555 127 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 LRRC31Q6UY01 552 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 FAM131BQ86XD5 332 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 ARFGAP1Q8N6T3 406 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 C12orf76Q8N812 135 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 MAB21L3Q8N8X9 362 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 MAIP1Q8WWC4 291 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 MSLNLQ96KJ4 702 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 WDR24Q96S15 920 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 EPAS1Q99814 870 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 KLF16Q9BXK1 252 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-242ENST00000488013 TLR10Q9BXR5 811 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 TKTL2Q9H0I9 626 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 S1PR5Q9H228 398 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 ZWILCHQ9H900 591 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 OBP2AQ9NY56 170 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 STIM2Q9P246 746 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 SFMBT1Q9UHJ3 866 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 CD207Q9UJ71 328 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 SNX12Q9UMY4 172 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 FAM50BQ9Y247 325 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 CHD9Q3L8U1 2897 aa11.46□□□□□ -0.57
HDLBP-242ENST00000488013 KIAA1671Q9BY89 1806 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 E2F8A0AVK6 867 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 KCNK3O14649 394 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 TBX18O95935 607 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 RARAP10276 462 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-242ENST00000488013 L1CAMP32004 1257 aa11.45□□□□□ -0.58
HDLBP-242ENST00000488013 PTPN7P35236 360 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms