RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 CRB3Q9BUF7 120 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 QTRT1Q9BXR0 403 aaKnown RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 NRIP3Q9NQ35 241 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 FSCN3Q9NQT6 498 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 FBXO28Q9NVF7 368 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ARL8BQ9NVJ2 186 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 SLC52A1Q9NWF4 448 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 KLHL13Q9P2N7 655 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 TAGLN3Q9UI15 199 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 HEMK1Q9Y5R4 338 aaPredicted RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 CCDC187A0A096LP49 1063 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 F5H423 210 aaPredicted RBP4.67□□□□□ -1.66
TTC3-220ENST00000487711 DSCR3O14972 297 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 NPC1O15118 1278 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 CTIFO43310 598 aaKnown RBP4.67□□□□□ -1.66
TTC3-220ENST00000487711 ASNA1O43681 348 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 TAF5LO75529 589 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 ANXA6P08133 673 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 ITGA5P08648 1049 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 MATN1P21941 496 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 KELP23276 732 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 DUSP1P28562 367 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 AKT1P31749 480 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 VPS41P49754 854 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 CBFBQ13951 182 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 MORC3Q14149 939 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 SPARCL1Q14515 664 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 GRM4Q14833 912 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 KPNB1Q14974 876 aaKnown RBP4.67□□□□□ -1.66
TTC3-220ENST00000487711 ELF2Q15723 593 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 SUPT20HL1Q3ZLR7 823 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 MSANTD2Q6P1R3 559 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 NEK8Q86SG6 692 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 MYLK4Q86YV6 388 aaPredicted RBP4.67□□□□□ -1.66
TTC3-220ENST00000487711 SPICE1Q8N0Z3 855 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 GALNT16Q8N428 558 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 OR52L2PQ8NGH6 319 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 OSR1Q8TAX0 266 aaPredicted RBP4.67□□□□□ -1.66
TTC3-220ENST00000487711 WDR60Q8WVS4 1066 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 AKAP1Q92667 903 aaKnown RBP eCLIP4.67□□□□□ -1.66
TTC3-220ENST00000487711 PMM1Q92871 262 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 FAM118BQ9BPY3 351 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 NUAK2Q9H093 628 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 OBP2BQ9NPH6 170 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 RXFP3Q9NSD7 469 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 SPATA31A1Q5TZJ5 1347 aa4.67□□□□□ -1.66
TTC3-220ENST00000487711 SMIM35A0A1B0GVV1 85 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 DHHO43323 396 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 DNPH1O43598 174 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 KLRK1P26718 216 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 TACR3P29371 465 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 CHAF1AQ13111 956 aaPredicted RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 PUM3Q15397 648 aaKnown RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 SEC23BQ15437 767 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 PFKFB4Q16877 469 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 MTX3Q5HYI7 312 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 RINT1Q6NUQ1 792 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 NRSN1Q8IZ57 195 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 FAM71BQ8TC56 605 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 ZNF398Q8TD17 642 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 SLC22A17Q8WUG5 538 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 STYXQ8WUJ0 223 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 POF1BQ8WVV4 589 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 RNF26Q9BY78 433 aaPredicted RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 CDCP1Q9H5V8 836 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 SCAF8Q9UPN6 1271 aaKnown RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 UBE2J1Q9Y385 318 aaPredicted RBP4.66□□□□□ -1.66
TTC3-220ENST00000487711 PCDHB7Q9Y5E2 793 aa4.66□□□□□ -1.66
TTC3-220ENST00000487711 LGALS16A8MUM7 142 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 M0QZQ0 153 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 TNFRSF6BO95407 300 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 CER1O95813 267 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 SLC8A1P32418 973 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 YPEL5P62699 121 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 ICA1Q05084 483 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 BIRC2Q13490 618 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 TRIM71Q2Q1W2 868 aaKnown RBP4.65□□□□□ -1.67
TTC3-220ENST00000487711 ZACNQ401N2 412 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 ZKSCAN2Q63HK3 967 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 ZNF626Q68DY1 528 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 SLC2A7Q6PXP3 512 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 KYAT3Q6YP21 454 aaKnown RBP4.65□□□□□ -1.67
TTC3-220ENST00000487711 ATG16L2Q8NAA4 619 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 GLMPQ8WWB7 406 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 MAP4K1Q92918 833 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 FAR2Q96K12 515 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 ASNSD1Q9NWL6 643 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 SEMA5BQ9P283 1151 aa4.65□□□□□ -1.67
TTC3-220ENST00000487711 SIRT4Q9Y6E7 314 aaPredicted RBP4.65□□□□□ -1.67
TTC3-220ENST00000487711 SETD1BQ9UPS6 1966 aaKnown RBP4.64□□□□□ -1.67
TTC3-220ENST00000487711 CYP2D7A0A087X1C5 515 aa4.64□□□□□ -1.67
TTC3-220ENST00000487711 WDR91A4D1P6 747 aa4.64□□□□□ -1.67
TTC3-220ENST00000487711 FCHO1O14526 889 aa4.64□□□□□ -1.67
TTC3-220ENST00000487711 ATP5F1P24539 256 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms