RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SERPINF2P08697 491 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 HOXD12P35452 270 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 IL12RB1P42701 662 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 SLC8A3P57103 927 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 ZNF252P-AS1Q0IIN9 211 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 ENPP2Q13822 863 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
VPS16-208ENST00000487461 FUT11Q495W5 492 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 PKDCCQ504Y2 493 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
VPS16-208ENST00000487461 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 CPXM2Q8N436 756 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
VPS16-208ENST00000487461 LRRC4Q9HBW1 653 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 ARMCX3Q9UH62 379 aaPredicted RBP12.77□□□□□ -0.37
VPS16-208ENST00000487461 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
VPS16-208ENST00000487461 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 GABBR2O75899 941 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 SMC2O95347 1197 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 CYBBP04839 570 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 VDRP11473 427 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 CD19P15391 556 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 SPINK2P20155 84 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 BCAT1P54687 386 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 LRRC63Q05C16 580 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 FOXC1Q12948 553 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 BSPRYQ5W0U4 402 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 EDEM1Q92611 657 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 HSPA12BQ96MM6 686 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 GTPBP2Q9BX10 602 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 MKRN2Q9H000 416 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 ITM2CQ9NQX7 267 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 HESX1Q9UBX0 185 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 SFMBT1Q9UHJ3 866 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 KIAA1257Q9ULG3 409 aa12.76□□□□□ -0.37
VPS16-208ENST00000487461 TNRC6BQ9UPQ9 1833 aaKnown RBP12.76□□□□□ -0.37
VPS16-208ENST00000487461 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 E7ENQ6 273 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 O00370 1275 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 NPC1O15118 1278 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 TSPAN3O60637 253 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 NDUFS2O75306 463 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 MAOBP27338 520 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 ADIGQ0VDE8 80 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 ZNF234Q14588 700 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 STARD3Q14849 445 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 ANKS1BQ7Z6G8 1248 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 OR2I1PQ8NGU4 316 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 TOE1Q96GM8 510 aaKnown RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 DHTKD1Q96HY7 919 aaPredicted RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 ZSWIM1Q9BR11 485 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 PRDM16Q9HAZ2 1276 aa12.75□□□□□ -0.37
VPS16-208ENST00000487461 OLA1Q9NTK5 396 aaKnown RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 HBS1LQ9Y450 684 aaKnown RBP12.75□□□□□ -0.37
VPS16-208ENST00000487461 USP24Q9UPU5 2620 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 TIMM44O43615 452 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 CALCAP01258 141 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 LCP1P13796 627 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 PRKCHP24723 683 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 CD6P30203 668 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 FMO5P49326 533 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 HARS2P49590 506 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms