RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
TRIM56-204ENST00000487252 KIAA0895LQ68EN5 471 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 SLC39A4Q6P5W5 647 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 USP53Q70EK8 1073 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 CXorf38Q8TB03 319 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 MSTO1Q9BUK6 570 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
TRIM56-204ENST00000487252 TMEM30AQ9NV96 361 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 F8P00451 2351 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 F8VP50 259 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 WNT9AO14904 365 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 HNRNPDLO14979 420 aaKnown RBP12.34□□□□□ -0.43
TRIM56-204ENST00000487252 NOBOXO60393 691 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 GP1BAP07359 652 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 ANXA13P27216 316 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 CD38P28907 300 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
TRIM56-204ENST00000487252 LIG4P49917 911 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 TBR1Q16650 682 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 GEN1Q17RS7 908 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 SOWAHAQ2M3V2 549 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 CPLX2Q6PUV4 134 aaKnown RBP12.34□□□□□ -0.43
TRIM56-204ENST00000487252 TPGS1Q6ZTW0 290 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 OXR1Q8N573 874 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 TOP6BLQ8N6T0 577 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 PDZD8Q8NEN9 1154 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 PCED1BQ96HM7 432 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
TRIM56-204ENST00000487252 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
TRIM56-204ENST00000487252 A0A1B0GVM2 712 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 E9PMD0 336 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 GJB6O95452 261 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 PENKP01210 267 aaPredicted RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 EPHX1P07099 455 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 ZDHHC11BP0C7U3 371 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 CKMT1AP12532 417 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 LMO2P25791 158 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 TNFRSF8P28908 595 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 CACNA2D1P54289 1103 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 NUCB2P80303 420 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 EIF4HQ15056 248 aaKnown RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 E2F5Q15329 346 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 SPATS2Q86XZ4 545 aaKnown RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 NT5DC4Q86YG4 428 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 UCMAQ8WVF2 138 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 BICD1Q96G01 975 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 GBP4Q96PP9 640 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 SYT15Q9BQS2 421 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM56-204ENST00000487252 ELOVL2Q9NXB9 296 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 CDH9Q9ULB4 789 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 CELSR1Q9NYQ6 3014 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 ADGRG4Q8IZF6 3080 aa12.33□□□□□ -0.44
TRIM56-204ENST00000487252 MED13Q9UHV7 2174 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 H0YCG3 227 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 TLR4O00206 839 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 YWHAQP27348 245 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 MCM7P33993 719 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 CD97P48960 835 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 ACOT2P49753 483 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 NEK4P51957 841 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
TRIM56-204ENST00000487252 RPS14P62263 151 aaKnown RBP12.32□□□□□ -0.44
TRIM56-204ENST00000487252 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 CLCA4Q14CN2 919 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 SLC25A45Q8N413 288 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 LRRC52Q8N7C0 313 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
TRIM56-204ENST00000487252 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 HPS3Q969F9 1004 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
TRIM56-204ENST00000487252 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 PLK2Q9NYY3 685 aa12.32□□□□□ -0.44
TRIM56-204ENST00000487252 FAM92AA1XBS5 289 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 CYP26A1O43174 497 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 IRF1P10914 325 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 POLR2BP30876 1174 aaKnown RBP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 NCAPHQ15003 741 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 TMEM215Q68D42 235 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 SERPINA13PQ6UXR4 307 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 Q6ZNB5 142 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms