RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 LHX1P48742 406 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ARID5AQ03989 594 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 SCARA3Q6AZY7 606 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 CLEC14AQ86T13 490 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 SLC25A45Q8N413 288 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 OXR1Q8N573 874 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 SYT15Q9BQS2 421 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 C17orf75Q9HAS0 396 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ELOVL2Q9NXB9 296 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ANAPC2Q9UJX6 822 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 FBXO10Q9UK96 956 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 ENTPD2Q9Y5L3 495 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 MYH11P35749 1972 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 GREM1O60565 184 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 RTN2O75298 545 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 CKMT1AP12532 417 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 POLR2BP30876 1174 aaKnown RBP12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 KRT2P35908 639 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 GALCP54803 685 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 MFAP3P55082 362 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 CAMK2GQ13555 558 aaPredicted RBP12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 FHL5Q5TD97 284 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 RINT1Q6NUQ1 792 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 SSC4DQ8WTU2 575 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 ASB7Q9H672 318 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 NCKAP1Q9Y2A7 1128 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 SLC27A6Q9Y2P4 619 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
ATPAF1-205ENST00000487193 SPENQ96T58 3664 aaKnown RBP12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 MTSS1O43312 755 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 PLS3P13797 630 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 TGM2P21980 687 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 MUTP22033 750 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 RPS6KB1P23443 525 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 CDC25AP30304 524 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 SLC5A2P31639 672 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 PNPLA4P41247 253 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 CPLX2Q6PUV4 134 aaKnown RBP12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 VASH2Q86V25 355 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 HTR3CQ8WXA8 447 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 TNFRSF25Q93038 417 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 ARRDC3Q96B67 414 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 C8orf48Q96LL4 319 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 AGXT2Q9BYV1 514 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 ADNPQ9H2P0 1102 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
ATPAF1-205ENST00000487193 A0A0B4J269 797 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 GABRDO14764 452 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 TBX18O95935 607 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 ITGB3P05106 788 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 OR52Z1P0C646 297 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 RNF224P0DH78 156 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 PLCG1P19174 1290 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 KCNAB2Q13303 367 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 MORC3Q14149 939 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 KCNJ12Q14500 433 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 SOWAHAQ2M3V2 549 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 NUP93Q8N1F7 819 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 FBXL16Q8N461 479 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 PDZD8Q8NEN9 1154 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 OR4C6Q8NH72 309 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 WDR36Q8NI36 951 aaKnown RBP12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 IFI44Q8TCB0 444 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 PCED1BQ96HM7 432 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 CYLDQ9NQC7 956 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 ZNF71Q9NQZ8 489 aaPredicted RBP12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms