RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 BUB1BO60566 1050 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 IGLV3-25P01717 112 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 HDCP19113 662 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 PSMA2P25787 234 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 SDC4P31431 198 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 PTPN9P43378 593 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 SULT1E1P49888 294 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TUBP50607 506 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 ATP11AP98196 1134 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 CWF19L1Q69YN2 538 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 ZDHHC14Q8IZN3 488 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TDRD5Q8NAT2 981 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 FNIP1Q8TF40 1166 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TRIM62Q9BVG3 475 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TSGA10Q9BZW7 698 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TASP1Q9H6P5 420 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 KCND1Q9NSA2 647 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 SYNJ2BP-COX16A0A087WUM0 186 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 GRID2IPA4D2P6 1211 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 M0QYT0 321 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 MSI1O43347 362 aaKnown RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 PROSCO94903 275 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 ENDOD1O94919 500 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 OLFM2O95897 454 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 TRUB2O95900 331 aaKnown RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 ATP5C1P36542 298 aaKnown RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 ZXDBP98169 803 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 CDO1Q16878 200 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 ARHGAP29Q52LW3 1261 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 KLHDC10Q6PID8 442 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 MIB1Q86YT6 1006 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 FAM172AQ8WUF8 416 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 GKN1Q9NS71 199 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 MARCH2Q9P0N8 246 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 COX16Q9P0S2 106 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 IP6K2Q9UHH9 426 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 HYOU1Q9Y4L1 999 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-229ENST00000486665 CLUHO75153 1309 aa13.31□□□□□ -0.28
HDAC6-229ENST00000486665 FAM186AA6NE01 2351 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 MYO16Q9Y6X6 1858 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 SLC12A8A0AV02 714 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 PI15O43692 258 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 PALMO75781 387 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 HMBSP08397 361 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 TCF4P15884 667 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 DDX6P26196 483 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 HDAC4P56524 1084 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 DEUP1Q05D60 604 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 NME3Q13232 169 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 PIGHQ14442 188 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 GET4Q7L5D6 327 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 TADA2BQ86TJ2 420 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 NPAS3Q8IXF0 933 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 NIPA2Q8N8Q9 360 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 LRRC57Q8N9N7 239 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 FGF13Q92913 245 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 WBP2Q969T9 261 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 MYADMQ96S97 322 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 NACA2Q9H009 215 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 FAM204AQ9H8W3 233 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 OLA1Q9NTK5 396 aaKnown RBP13.3□□□□□ -0.28
HDAC6-229ENST00000486665 PIGVQ9NUD9 493 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 SMPD4Q9NXE4 827 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 ALG6Q9Y672 507 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 CAPN6Q9Y6Q1 641 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 DOCK8Q8NF50 2099 aa13.3□□□□□ -0.28
HDAC6-229ENST00000486665 GVINP1Q7Z2Y8 2422 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 PROB1E7EW31 1015 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 IRAK2O43187 625 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms