RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SPEGQ15772 3267 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 SCN1AP35498 2009 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 NLRC5Q86WI3 1866 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 SLC12A8A0AV02 714 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 CCDC66A2RUB6 948 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 CTAGE9A4FU28 777 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ZNF840PA6NDX5 716 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 MIF4GDA9UHW6 222 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 ESPNB1AK53 854 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 DAPK3O43293 454 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 PALMO75781 387 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 MTA2O94776 668 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 PROSCO94903 275 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ADRB1P08588 477 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 MAN1A1P33908 653 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 GJC1P36383 396 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 PTPN9P43378 593 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 SLC11A2P49281 568 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 AIF1P55008 147 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 HADHBP55084 474 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 USP46P62068 366 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 RPL7AP62424 266 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 PTP4A2Q12974 167 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ADAM15Q13444 863 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 KRT81Q14533 505 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 RPS6KA1Q15418 735 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 CLUL1Q15846 466 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 BOLA3Q53S33 107 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 GPR158Q5T848 1215 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 CCDC181Q5TID7 509 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 NUGGCQ68CJ6 796 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 C11orf63Q6NUN7 778 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 LRRC31Q6UY01 552 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 TMEM184AQ6ZMB5 413 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 EMC1Q8N766 993 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 MAB21L3Q8N8X9 362 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 VN1R2Q8NFZ6 395 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ZNF592Q92610 1267 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ACSF2Q96CM8 615 aaPredicted RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 DDX23Q9BUQ8 820 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 APOL5Q9BWW9 433 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 MAK16Q9BXY0 300 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 DCLK3Q9C098 648 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 LACRTQ9GZZ8 138 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ADAM7Q9H2U9 754 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 KCND1Q9NSA2 647 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.24□□□□□ -1.25
UBR4-214ENST00000486515 THG1LQ9NWX6 298 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 DDX56Q9NY93 547 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 DONSONQ9NYP3 566 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 IL37Q9NZH6 218 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 STIM2Q9P246 746 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 DNMT3BQ9UBC3 853 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 TJP2Q9UDY2 1190 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 TMEM59LQ9UK28 342 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 NAALADL1Q9UQQ1 740 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 REXO2Q9Y3B8 237 aaKnown RBP7.24□□□□□ -1.25
UBR4-214ENST00000486515 JRKLQ9Y4A0 524 aa7.24□□□□□ -1.25
UBR4-214ENST00000486515 ATG2AQ2TAZ0 1938 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 COL4A4P53420 1690 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 FAM92AA1XBS5 289 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 C2CD4BA6NLJ0 364 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 BUB1BO60566 1050 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 VNN2O95498 520 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TRUB2O95900 331 aaKnown RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 HMBSP08397 361 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 HMGA1P17096 107 aaKnown RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 COMTP21964 271 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 GBP2P32456 591 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 PCK1P35558 622 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 FLT3P36888 993 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ARL4AP40617 200 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 RWDD2BP57060 319 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TBX4P57082 545 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZXDAP98168 799 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 CYP4F8P98187 520 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 NNTQ13423 1086 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 CCDC14Q49A88 953 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 EFHC2Q5JST6 749 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 BRMS1LQ5PSV4 323 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 SEL1L2Q5TEA6 688 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 SNX30Q5VWJ9 437 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 KLHDC10Q6PID8 442 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 GET4Q7L5D6 327 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 SLFN11Q7Z7L1 901 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 GPR149Q86SP6 731 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 CCDC50Q8IVM0 306 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 REXO1L1PQ8IX06 675 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 YAF2Q8IY57 180 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZNF276Q8N554 614 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 C12orf76Q8N812 135 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 NIPA2Q8N8Q9 360 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TPCN2Q8NHX9 752 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 KIF18AQ8NI77 898 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 JOSD2Q8TAC2 188 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms