RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ACOX2Q99424 681 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 MIS12Q9H081 205 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 BCCIPQ9P287 314 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 APEX2Q9UBZ4 518 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 STOML2Q9UJZ1 356 aa19.22■□□□□ 0.67
PRPF40A-209ENST00000486100 TCRBV21S2A2A0A5A6 115 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 LATS1O95835 1130 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 HOXB2P14652 356 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 WASP42768 502 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 ATXN1P54253 815 aaKnown RBP19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 MAN2A1Q16706 1144 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 ARHGAP44Q17R89 818 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 MPPE1Q53F39 396 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 PLA2G2CQ5R387 149 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 DENND1BQ6P3S1 775 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 SCUBE3Q8IX30 993 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 CHPFQ8IZ52 775 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 PGBD3Q8N328 593 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 DDI1Q8WTU0 396 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 HMGB4Q8WW32 186 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 GABRG3Q99928 467 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 SLC2A11Q9BYW1 496 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 ST7Q9NRC1 585 aa19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 CDV3Q9UKY7 258 aaKnown RBP19.21■□□□□ 0.67
PRPF40A-209ENST00000486100 DMXL1Q9Y485 3027 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 A0A1W2PQF6 199 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 BECN2A8MW95 431 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 GFRA2O00451 464 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 SART1O43290 800 aaKnown RBP19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 MSI1O43347 362 aaKnown RBP19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 THAP12O43422 761 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 GNA15P30679 374 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 USP8P40818 1118 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 P2RY2P41231 377 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 ZNF445P59923 1031 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 APBA1Q02410 837 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 BYSLQ13895 437 aaKnown RBP19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 ADGRF1Q5T601 910 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 PMS2CLQ68D20 193 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 UNC45BQ8IWX7 931 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 NETO1Q8TDF5 533 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 RLN3Q8WXF3 142 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 SHC3Q92529 594 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 PIWIL1Q96J94 861 aaKnown RBP19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 RTKNQ9BST9 563 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 SLC4A5Q9BY07 1137 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 ACP6Q9NPH0 428 aa19.2■□□□□ 0.66
PRPF40A-209ENST00000486100 KIAA1549LQ6ZVL6 1849 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 ZBTB24O43167 697 aaPredicted RBP19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 FYNP06241 537 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 NCAM1P13591 858 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 BCKDHBP21953 392 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 MPLP40238 635 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 CCDC6Q16204 474 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 GEN1Q17RS7 908 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 VWA3BQ502W6 1294 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 TMEM110Q86TL2 294 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 TMA16Q96EY4 203 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 TUBGCP2Q9BSJ2 902 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 NDST4Q9H3R1 872 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 CD248Q9HCU0 757 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 SIX2Q9NPC8 291 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 VPS45Q9NRW7 570 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 CLEC4EQ9ULY5 219 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 DCHS1Q96JQ0 3298 aa19.19■□□□□ 0.66
PRPF40A-209ENST00000486100 BCLAF3A2AJT9 711 aaKnown RBP19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 NPC1O15118 1278 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 GDF9O60383 454 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 TSPAN3O60637 253 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 IGLV3-27P01718 113 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 GABRG2P18507 467 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 TBX4P57082 545 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 CREB5Q02930 508 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 RING1Q06587 406 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 SF3A2Q15428 464 aaKnown RBP19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 MAP7D1Q3KQU3 841 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 NUGGCQ68CJ6 796 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 BEND5Q7L4P6 421 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 C12orf50Q8NA57 414 aaPredicted RBP19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 UCMAQ8WVF2 138 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 AZIN2Q96A70 460 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 FAM149B1Q96BN6 582 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 SPACA7Q96KW9 195 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 CACNA2D2Q9NY47 1150 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 THAP10Q9P2Z0 257 aaPredicted RBP19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 CYTH4Q9UIA0 394 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 DNAJC12Q9UKB3 198 aa19.18■□□□□ 0.66
PRPF40A-209ENST00000486100 WASH3PC4AMC7 463 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 SLC30A4O14863 429 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 PAPSS1O43252 624 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 MAP3K13O43283 966 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 TIMM44O43615 452 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 CAVIN2O95810 425 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 HOXD9P28356 352 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 SLC11A2P49281 568 aa19.17■□□□□ 0.66
PRPF40A-209ENST00000486100 PTK2Q05397 1052 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms