RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 IRX2Q9BZI1 471 aaPredicted RBP18.29■□□□□ 0.52
CHMP3-207ENST00000485465 GOLPH3Q9H4A6 298 aa18.29■□□□□ 0.52
CHMP3-207ENST00000485465 GKN1Q9NS71 199 aa18.29■□□□□ 0.52
CHMP3-207ENST00000485465 SMPD4Q9NXE4 827 aa18.29■□□□□ 0.52
CHMP3-207ENST00000485465 ARHGAP26Q9UNA1 814 aa18.29■□□□□ 0.52
CHMP3-207ENST00000485465 DENND4CQ5VZ89 1909 aa18.29■□□□□ 0.52
CHMP3-207ENST00000485465 IGLV3-27P01718 113 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 HMBSP08397 361 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 MIPP30301 263 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 RING1Q06587 406 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 ZC3H12AQ5D1E8 599 aaKnown RBP18.28■□□□□ 0.52
CHMP3-207ENST00000485465 DAB2IPQ5VWQ8 1189 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 SYCE1Q8N0S2 351 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 USP13Q92995 863 aaPredicted RBP18.28■□□□□ 0.52
CHMP3-207ENST00000485465 RNF34Q969K3 372 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 FCRL2Q96LA5 508 aaPredicted RBP18.28■□□□□ 0.52
CHMP3-207ENST00000485465 MYADMQ96S97 322 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 SMG9Q9H0W8 520 aaKnown RBP18.28■□□□□ 0.52
CHMP3-207ENST00000485465 TDP1Q9NUW8 608 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 HYOU1Q9Y4L1 999 aa18.28■□□□□ 0.52
CHMP3-207ENST00000485465 KIF5CO60282 957 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 SLC2A3P11169 496 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 CCR1P32246 355 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-207ENST00000485465 SSR1P43307 286 aaKnown RBP18.27■□□□□ 0.52
CHMP3-207ENST00000485465 KCNQ1P51787 676 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 ZXDBP98169 803 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 PPP2R5DQ14738 602 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 FAM78AQ5JUQ0 283 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 BRMS1LQ5PSV4 323 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 ZSCAN30Q86W11 494 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 FAM131BQ86XD5 332 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 ARID3BQ8IVW6 561 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-207ENST00000485465 TRIM58Q8NG06 486 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 PLD4Q96BZ4 506 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 ALS2CR12Q96Q35 445 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 WDCPQ9H6R7 721 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.27■□□□□ 0.52
CHMP3-207ENST00000485465 PCSK1NQ9UHG2 260 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
CHMP3-207ENST00000485465 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-207ENST00000485465 KCNU1A8MYU2 1149 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 LEFTY2O00292 366 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 SPOPO43791 374 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 STC2O76061 302 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 PRAMEF12O95522 483 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 IRF1P10914 325 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 TCF4P15884 667 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 TAS2R40P59535 323 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 DDX42Q86XP3 938 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHMP3-207ENST00000485465 UNC45BQ8IWX7 931 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 ADAMTS19Q8TE59 1207 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 SH3RF2Q8TEC5 729 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 SMARCD2Q92925 531 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 ASB16Q96NS5 453 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 TRPV4Q9HBA0 871 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 CCL26Q9Y258 94 aa18.26■□□□□ 0.51
CHMP3-207ENST00000485465 DENND4AQ7Z401 1863 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 PRPSAP2O60256 369 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 FTCDO95954 541 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 APOEP02649 317 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 LAMP2P13473 410 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 TCF3P15923 654 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 IL1R2P27930 398 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 HARS2P49590 506 aaKnown RBP18.25■□□□□ 0.51
CHMP3-207ENST00000485465 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
CHMP3-207ENST00000485465 HADHQ16836 314 aaKnown RBP18.25■□□□□ 0.51
CHMP3-207ENST00000485465 PUS10Q3MIT2 529 aaKnown RBP18.25■□□□□ 0.51
CHMP3-207ENST00000485465 ZNF569Q5MCW4 686 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 NUGGCQ68CJ6 796 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 NT5DC3Q86UY8 548 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 CELF5Q8N6W0 485 aaKnown RBP18.25■□□□□ 0.51
CHMP3-207ENST00000485465 CCDC185Q8N715 623 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 WBP2Q969T9 261 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 NTAN1Q96AB6 310 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 PEBP4Q96S96 227 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 KIF9Q9HAQ2 790 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 ANLNQ9NQW6 1124 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 PRDM6Q9NQX0 595 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 CFAP97Q9P2B7 532 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 SLC12A6Q9UHW9 1150 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 AMFRQ9UKV5 643 aa18.25■□□□□ 0.51
CHMP3-207ENST00000485465 GREM1O60565 184 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 KLKB1P03952 638 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 CORO1AP31146 461 aaKnown RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 ADRA1BP35368 520 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 AIF1P55008 147 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 ARL13BQ3SXY8 428 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 BOLA3Q53S33 107 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 TXNRD3NBQ6F5E7 133 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 CYP4V2Q6ZWL3 525 aaPredicted RBP18.24■□□□□ 0.51
CHMP3-207ENST00000485465 ATP6V0D2Q8N8Y2 350 aa18.24■□□□□ 0.51
CHMP3-207ENST00000485465 CD101Q93033 1021 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms