RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PIP4P1Q86T03 277 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 SMARCE1Q969G3 411 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 SLC35C1Q96A29 364 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 EEF2KMTQ96G04 330 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 ULBP1Q9BZM6 244 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 CACNA2D2Q9NY47 1150 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 PLK2Q9NYY3 685 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 HESX1Q9UBX0 185 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 ARMCX3Q9UH62 379 aaPredicted RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 STOML2Q9UJZ1 356 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 TSPAN16Q9UKR8 245 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 PCDH15Q96QU1 1955 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 KRT37O76014 449 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 PAEPP09466 180 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 SETSIPP0DME0 302 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 C7P10643 843 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 PMS1P54277 932 aaKnown RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 SEMA3BQ13214 749 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 GEN1Q17RS7 908 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 PKDCCQ504Y2 493 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 RSRC2Q7L4I2 434 aaKnown RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 DENND1CQ8IV53 801 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 DHTKD1Q96HY7 919 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 CEP63Q96MT8 703 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 SLC32A1Q9H598 525 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 LRRC4Q9HBW1 653 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 USP36Q9P275 1121 aaKnown RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 HOOK1Q9UJC3 728 aaKnown RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 CYP8B1Q9UNU6 501 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 NFE2L3Q9Y4A8 694 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 RAD54BQ9Y620 910 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 HMBSP08397 361 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 GFPT1Q06210 699 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-206ENST00000484733 STARD3Q14849 445 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 MPPE1Q53F39 396 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 LCLAT1Q6UWP7 414 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 ANKS1BQ7Z6G8 1248 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 FOXJ1Q92949 421 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 CNGB3Q9NQW8 809 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 ITM2CQ9NQX7 267 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 ELOVL2Q9NXB9 296 aa11.99□□□□□ -0.49
SCFD1-206ENST00000484733 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 GOLGA6L4A6NEF3 574 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 WASH3PC4AMC7 463 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 TULP2O00295 520 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 O00370 1275 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 P4HA2O15460 535 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 NDUFS2O75306 463 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 IGLV3-19P01714 112 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 PROS1P07225 676 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 NUCB2P80303 420 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 UAP1L1Q3KQV9 507 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 FMNL3Q8IVF7 1028 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 TRIML1Q8N9V2 468 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 IRGQQ8WZA9 623 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 ABCC13Q9NSE7 274 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 SUSD2Q9UGT4 822 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 SYPP08247 313 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 CD6P30203 668 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 OXTRP30559 389 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 IL12RB1P42701 662 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 FMO5P49326 533 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 HARS2P49590 506 aaKnown RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 STIM1Q13586 685 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 STILQ15468 1287 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 FUT11Q495W5 492 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 SYCP2LQ5T4T6 812 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 BSPRYQ5W0U4 402 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 MSANTD2Q6P1R3 559 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 KIAA0907Q7Z7F0 614 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 DEFB119Q8N690 84 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 DEFB124Q8NES8 71 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 WFIKKN2Q8TEU8 576 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 RNF139Q8WU17 664 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 BHMTQ93088 406 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 PRDM16Q9HAZ2 1276 aa11.98□□□□□ -0.49
SCFD1-206ENST00000484733 DNAAF2Q9NVR5 837 aaKnown RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 WSB2Q9NYS7 404 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-206ENST00000484733 SPTBN2O15020 2390 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 TRIM49BA6NDI0 452 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 ARHGAP33O14559 1287 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 PSMA7O14818 248 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CFIP05156 583 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 DAOAP59103 153 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 ADIGQ0VDE8 80 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 HNRNPDQ14103 355 aaKnown RBP11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CNGA2Q16280 664 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 WDR45BQ5MNZ6 344 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 KIAA1324Q6UXG2 1013 aaKnown RBP11.97□□□□□ -0.49
SCFD1-206ENST00000484733 CADM4Q8NFZ8 388 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 DDI1Q8WTU0 396 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 SLC35F5Q8WV83 523 aa11.97□□□□□ -0.49
SCFD1-206ENST00000484733 HSPA12BQ96MM6 686 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms