RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RARGP13631 454 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 JUPP14923 745 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 CTSKP43235 329 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 CYP2J2P51589 502 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 GOLGA8FQ08AF8 430 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 GOLGA8DPQ0D2H9 430 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 TARDBPQ13148 414 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 TRPC3Q13507 836 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 TEAD4Q15561 434 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 C10orf120Q5SQS8 335 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 SERPINA13PQ6UXR4 307 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 ZNF366Q8N895 744 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 C12orf29Q8N999 325 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 ORAI3Q9BRQ5 295 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 LHX5Q9H2C1 402 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 FBXO44Q9H4M3 255 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 KIAA1586Q9HCI6 787 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 FAM49BQ9NUQ9 324 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 ELOVL2Q9NXB9 296 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 SCML2Q9UQR0 700 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 AK5Q9Y6K8 562 aa11.44□□□□□ -0.58
SMARCC1-205ENST00000483847 HHLA1C9JL84 531 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 J3QKU1 62 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 CLIC2O15247 247 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 TGFB1I1O43294 461 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 TSPAN3O60637 253 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 FSBPO95073 299 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 ATICP31939 592 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 CASP4P49662 377 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 CFHR1Q03591 330 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 CAMK2GQ13555 558 aaPredicted RBP11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 GPR155Q7Z3F1 870 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 ANKS1BQ7Z6G8 1248 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 SCD5Q86SK9 330 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 OR2T3Q8NH03 318 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 PLEKHO2Q8TD55 490 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 UCMAQ8WVF2 138 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 SYAP1Q96A49 352 aaPredicted RBP11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 TNIP3Q96KP6 325 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 DNMT3LQ9UJW3 386 aa11.43□□□□□ -0.58
SMARCC1-205ENST00000483847 A0A1B0GTQ1 180 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 PYCARD-AS1I3L0S3 204 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 ENC1O14682 589 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 RRP8O43159 456 aaKnown RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 PAPSS1O43252 624 aaPredicted RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 PHACTR2O75167 634 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 CLSTN1O94985 981 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 CD2BP2O95400 341 aaKnown RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 SEMA4FO95754 770 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 IGHV4-34P06331 123 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 HMBSP08397 361 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 CD27P26842 260 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 ADORA2BP29275 332 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 HNF1BP35680 557 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 STAT6P42226 847 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 TLE3Q04726 772 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 RTP5Q14D33 572 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 SHBQ15464 509 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 ZNF699Q32M78 642 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 ZNF667Q5HYK9 610 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 HES3Q5TGS1 186 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 KLHDC10Q6PID8 442 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 CLEC20AQ6ZU45 233 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 BRAPQ7Z569 592 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 CCDC65Q8IXS2 484 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 ENGASEQ8NFI3 743 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 VRTNQ9H8Y1 702 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 PCDHGA1Q9Y5H4 931 aa11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 SRPRBQ9Y5M8 271 aaKnown RBP11.42□□□□□ -0.58
SMARCC1-205ENST00000483847 TEX51A0A1B0GUA7 166 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CAPN9O14815 690 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 RFPL3O75679 317 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 VNN1O95497 513 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 LDOC1O95751 146 aaPredicted RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 ACADVLP49748 655 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 NDST1P52848 882 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 RPS14P62263 151 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CXADRP78310 365 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 BIRC3Q13489 604 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 EIF4HQ15056 248 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 INAVAQ3KP66 663 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 FBXL19Q6PCT2 694 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 STXBP4Q6ZWJ1 553 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 DENND1CQ8IV53 801 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CRYBG2Q8N1P7 616 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms