RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 SNX10Q9Y5X0 201 aa10.49□□□□□ -0.73
HDAC6-226ENST00000483656 LAMA2P24043 3122 aaKnown RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 FAM187AA6NFU0 413 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 LIASO43766 372 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 HEXIM1O94992 359 aaKnown RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CSH1P0DML2 217 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CSH2P0DML3 217 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PECAM1P16284 738 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 GOT1P17174 413 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 AMPD1P23109 780 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 GBP1P32455 592 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 ELF1P32519 619 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 IRS1P35568 1242 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PBX2P40425 430 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PSEN1P49768 467 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 AIF1P55008 147 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 ERVK-21P61565 698 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 DR1Q01658 176 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 UBE3AQ05086 875 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PPP6R3Q5H9R7 873 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 SNX30Q5VWJ9 437 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PLPP4Q5VZY2 271 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 SLC9A4Q6AI14 798 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 DRICH1Q6PGQ1 229 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 FBXO38Q6PIJ6 1188 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CCDC137Q6PK04 289 aaKnown RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 NPNTQ6UXI9 565 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CCNI2Q6ZMN8 369 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 DNAJB7Q7Z6W7 309 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 JAMLQ86YT9 394 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 MAP7D3Q8IWC1 876 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PLD5Q8N7P1 536 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 SLC35B2Q8TB61 432 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 ACTL9Q8TC94 416 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 RNF139Q8WU17 664 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CASKIN2Q8WXE0 1202 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 SLCO2A1Q92959 643 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 HAUS1Q96CS2 278 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 TRMT2BQ96GJ1 504 aaKnown RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 GDF15Q99988 308 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 TRIM51Q9BSJ1 452 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 TKTL2Q9H0I9 626 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 WDCPQ9H6R7 721 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 CCSER2Q9H7U1 834 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 ZNF334Q9HCZ1 680 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 TLR9Q9NR96 1032 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 TLR8Q9NR97 1041 aaKnown RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 ETNK2Q9NVF9 386 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 STIM2Q9P246 746 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 DNPEPQ9ULA0 475 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 MAGED2Q9UNF1 606 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-226ENST00000483656 NEU2Q9Y3R4 380 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 PCDHA11Q9Y5I1 949 aa10.48□□□□□ -0.73
HDAC6-226ENST00000483656 GBF1Q92538 1859 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ESYT3A0FGR9 886 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ZNF840PA6NDX5 716 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 PRRG1O14668 218 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 CSPG5O95196 566 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ADH1AP07327 375 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 MYBL2P10244 700 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 CA8P35219 290 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 OTUD4Q01804 1114 aaKnown RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 GUCY2DQ02846 1103 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 EFEMP1Q12805 493 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 DPYSQ14117 519 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 DHX34Q14147 1143 aaKnown RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 TFDP2Q14188 446 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 PPP2R5DQ14738 602 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 OASLQ15646 514 aaKnown RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 EFHC2Q5JST6 749 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 BRMS1LQ5PSV4 323 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 MAATS1Q7Z4T9 603 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 TMEM150AQ86TG1 271 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ATL2Q8NHH9 583 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 OVCA2Q8WZ82 227 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 SEC14L1Q92503 715 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 NKD2Q969F2 451 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 PSMG2Q969U7 264 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 OSBPL2Q9H1P3 480 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 ENTPD7Q9NQZ7 604 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 RCOR3Q9P2K3 495 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 DRG1Q9Y295 367 aaKnown RBP10.47□□□□□ -0.73
HDAC6-226ENST00000483656 CEP290O15078 2479 aa10.47□□□□□ -0.73
HDAC6-226ENST00000483656 CHD7Q9P2D1 2997 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 H3BRJ5 948 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 APOC4-APOC2K7ER74 178 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 NRG2O14511 850 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms