RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PKLRP30613 574 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 CENPCQ03188 943 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 POU6F1Q14863 301 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 LLGL1Q15334 1064 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 FAM47CQ5HY64 1035 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 SHEQ5VZ18 495 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 PIAS4Q8N2W9 510 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-205ENST00000483338 APPL2Q8NEU8 664 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 SLC7A3Q8WY07 619 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 ZNF347Q96SE7 839 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 TBCBQ99426 244 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 C1orf50Q9BV19 199 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 NPLQ9BXD5 320 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-205ENST00000483338 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 SEPT3Q9UH03 358 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 SERPINA10Q9UK55 444 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 AP4S1Q9Y587 144 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 ALG6Q9Y672 507 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 MAU2Q9Y6X3 613 aa8.07□□□□□ -1.12
COL4A5-205ENST00000483338 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
COL4A5-205ENST00000483338 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ARHGEF37A1IGU5 675 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ZNF839A8K0R7 811 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 E9PMD0 336 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 MEN1O00255 615 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 NDUFS2O75306 463 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ENTPD3O75355 529 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ALDH1A2O94788 518 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 GGPS1O95749 300 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 UCHL3P15374 230 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SLC9A1P19634 815 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 MCAMP43121 646 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 TRAPPC10P48553 1259 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SIK1P57059 783 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 MAP3K7CLP57077 242 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SLC13A5Q86YT5 568 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ZNF654Q8IZM8 581 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 C1orf54Q8WWF1 131 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 OR2B2Q9GZK3 357 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 DNAJC18Q9H819 358 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 AJAP1Q9UKB5 411 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ATP6V1G2-DDX39BF2Z307 99 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 PLOD2O00469 737 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 PRLP01236 227 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 CALM1P0DP23 149 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 CALM2P0DP24 149 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 CALM3P0DP25 149 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 DLATP10515 647 aaKnown RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 PCNAP12004 261 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ITIH1P19827 911 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 RRM1P23921 792 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 NAMPTP43490 491 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 AMPD3Q01432 767 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 FUT2Q10981 343 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 COX10Q12887 443 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 NKX1-1Q15270 411 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 LRRC41Q15345 812 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 MAPRE1Q15691 268 aaKnown RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 NRF1Q16656 503 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 ARHGAP44Q17R89 818 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 UNC5AQ6ZN44 842 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 PLEKHG7Q6ZR37 379 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 RNF207Q6ZRF8 634 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 TMEM126BQ8IUX1 230 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 HERC6Q8IVU3 1022 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 OMA1Q96E52 524 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 STN1Q9H668 368 aaKnown RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SSU72Q9NP77 194 aaKnown RBP8.06□□□□□ -1.12
COL4A5-205ENST00000483338 PNPLA3Q9NST1 481 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SLC8A2Q9UPR5 921 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 AP3M1Q9Y2T2 418 aa8.06□□□□□ -1.12
COL4A5-205ENST00000483338 SPOPO43791 374 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 SORBS3O60504 671 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 CAPNS1P04632 268 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TMEM253P0C7T8 217 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 ZNF26P17031 533 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-205ENST00000483338 PTPN1P18031 435 aaKnown RBP8.05□□□□□ -1.12
COL4A5-205ENST00000483338 AOC1P19801 751 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 MAPK10P53779 464 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 CLCQ05315 142 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 SCARF1Q14162 830 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 RAB39AQ14964 217 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 UBE3CQ15386 1083 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TBCCQ15814 346 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 RELL1Q8IUW5 271 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TRIM59Q8IWR1 403 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 FBXW8Q8N3Y1 598 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TTLQ8NG68 377 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 RASSF5Q8WWW0 418 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 SLCO2A1Q92959 643 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 KLF6Q99612 283 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-205ENST00000483338 LRRC19Q9H756 370 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TRIM39Q9HCM9 518 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 POLE4Q9NR33 117 aa8.05□□□□□ -1.12
COL4A5-205ENST00000483338 PPP1R1BQ9UD71 204 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-205ENST00000483338 TMCC3Q9ULS5 477 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms