RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TAF4O00268 1085 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 TULP2O00295 520 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 GJB3O75712 270 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 RALAP11233 206 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 KRT13P13646 458 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 HLA-EP13747 358 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 NDUFA8P51970 172 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 RING1Q06587 406 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 STARD3Q14849 445 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 TMEM215Q68D42 235 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 KLHDC10Q6PID8 442 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 RSRC2Q7L4I2 434 aaKnown RBP14.59□□□□□ -0.07
VARS-226ENST00000483275 RABEPKQ7Z6M1 372 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 CYP3A43Q9HB55 503 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 PNPLA8Q9NP80 782 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 MARCH2Q9P0N8 246 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 USP36Q9P275 1121 aaKnown RBP14.59□□□□□ -0.07
VARS-226ENST00000483275 FBXO10Q9UK96 956 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 TRAF3IP3Q9Y228 551 aa14.59□□□□□ -0.07
VARS-226ENST00000483275 ADAMTS20P59510 1910 aa14.58□□□□□ -0.07
VARS-226ENST00000483275 CABIN1Q9Y6J0 2220 aa14.58□□□□□ -0.07
VARS-226ENST00000483275 TSPAN3O60637 253 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 SYPP08247 313 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 FTH1P19P0C7X4 201 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 TRIM21P19474 475 aaKnown RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 TPMTP51580 245 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 BNC1Q01954 994 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 ZNF234Q14588 700 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 TRIP6Q15654 476 aaKnown RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 SYCP2LQ5T4T6 812 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 DCAF12L1Q5VU92 463 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 ANKS1BQ7Z6G8 1248 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 RAB44Q7Z6P3 723 aaPredicted RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 PIGZQ86VD9 579 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 MARCH9Q86YJ5 346 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 SLC4A11Q8NBS3 891 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 TMEM174Q8WUU8 243 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 SNX19Q92543 992 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 SNX21Q969T3 373 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 PIWIL1Q96J94 861 aaKnown RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 WSB2Q9NYS7 404 aaPredicted RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 THAP10Q9P2Z0 257 aaPredicted RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 CFAP45Q9UL16 551 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 HPSEQ9Y251 543 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 FNDC3AQ9Y2H6 1198 aaKnown RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 SLC27A6Q9Y2P4 619 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 USP3Q9Y6I4 520 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 NYNRINQ9P2P1 1898 aaKnown RBP14.58□□□□□ -0.08
VARS-226ENST00000483275 BPTFQ12830 3046 aa14.58□□□□□ -0.08
VARS-226ENST00000483275 GFRA2O00451 464 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 MSI1O43347 362 aaKnown RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 EPHX1P07099 455 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 CMA1P23946 247 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 SYKP43405 635 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 COPAP53621 1224 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 RAD23BP54727 409 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 YWHAGP61981 247 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS-226ENST00000483275 DPYDQ12882 1025 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 WDR45BQ5MNZ6 344 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 LAYNQ6UX15 382 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 INTS8Q75QN2 995 aaKnown RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 BHLHA9Q7RTU4 235 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 TMPRSS6Q8IU80 811 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 RBBP8NLQ8NC74 664 aaPredicted RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 DDI1Q8WTU0 396 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 CYB5D2Q8WUJ1 264 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 EDEM1Q92611 657 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 FOXJ1Q92949 421 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 TATDN2Q93075 761 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 SIPA1Q96FS4 1042 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 ULBP1Q9BZM6 244 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 FAM124BQ9H5Z6 455 aaPredicted RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 SUSD2Q9UGT4 822 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 EIF2B4Q9UI10 523 aaKnown RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 LHX6Q9UPM6 363 aa14.57□□□□□ -0.08
VARS-226ENST00000483275 GOLGA4Q13439 2230 aaKnown RBP14.57□□□□□ -0.08
VARS-226ENST00000483275 A0A1B0GTW7 788 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 SYNCRIPO60506 623 aaKnown RBP14.56□□□□□ -0.08
VARS-226ENST00000483275 RHOBTB3O94955 611 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 GNSP15586 552 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 PSEN1P49768 467 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 MXI1P50539 228 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 SGSHP51688 502 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 TKTL1P51854 596 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 ZNF423Q2M1K9 1284 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 C19orf48Q6RUI8 117 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 SERPINA13PQ6UXR4 307 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 TADA2BQ86TJ2 420 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 SLCO6A1Q86UG4 719 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 SETD7Q8WTS6 366 aaKnown RBP14.56□□□□□ -0.08
VARS-226ENST00000483275 PRCCQ92733 491 aaPredicted RBP14.56□□□□□ -0.08
VARS-226ENST00000483275 SPATA32Q96LK8 384 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 ELOVL2Q9NXB9 296 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms