RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TRABD2BA6NFA1 517 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 NPC1O15118 1278 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 PENKP01210 267 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 RPN1P04843 607 aaKnown RBP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 RALAP11233 206 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ACADMP11310 421 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 CSNK1EP49674 416 aaKnown RBP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 KIF11P52732 1056 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF132P52740 706 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 DLG4P78352 724 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ENPP2Q13822 863 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF234Q14588 700 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 SPOPLQ6IQ16 392 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 IL27RAQ6UWB1 636 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 DBX2Q6ZNG2 339 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 SV2AQ7L0J3 742 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 FAM124AQ86V42 546 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 UNC93AQ86WB7 457 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 CACUL1Q86Y37 369 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 EFCAB3Q8N7B9 438 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 UCMAQ8WVF2 138 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 SORCS1Q8WY21 1168 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 BBC3Q96PG8 261 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 TWNKQ96RR1 684 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 CDC6Q99741 560 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ZSCAN16Q9H4T2 348 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 DMAC2Q9NW81 257 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ELOVL2Q9NXB9 296 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 TOR4AQ9NXH8 423 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 CLEC4EQ9ULY5 219 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.76□□□□□ -1.17
CSDE1-206ENST00000483030 MTMR6Q9Y217 621 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 BTBD3Q9Y2F9 522 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF510Q9Y2H8 683 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 SLCO1B1Q9Y6L6 691 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 PCDH15Q96QU1 1955 aa7.76□□□□□ -1.17
CSDE1-206ENST00000483030 MYO18AQ92614 2054 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 WDFY3Q8IZQ1 3526 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PVALEFA0A1B0GWK0 134 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 FAM149AA5PLN7 773 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 EIF4E1BA6NMX2 242 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 KCNK3O14649 394 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 POLR2DO15514 142 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 FLRT2O43155 660 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 TIMM44O43615 452 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 STX6O43752 255 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PPP6R2O75170 966 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 DKK1O94907 266 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 KIF20AO95235 890 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ASS1P00966 412 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 IGLV3-19P01714 112 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 HLA-DRAP01903 254 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 EPHX1P07099 455 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PRKCHP24723 683 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CORO1AP31146 461 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CHKAP35790 457 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 MLLT3P42568 568 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 AFMP43652 599 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ASPAP45381 313 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 COPAP53621 1224 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 COG7P83436 770 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 EFEMP1Q12805 493 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CUL4BQ13620 913 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 SUZ12Q15022 739 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 KIF19Q2TAC6 998 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ZACNQ401N2 412 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CCDC157Q569K6 752 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 SERPINA13PQ6UXR4 307 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ANKS1BQ7Z6G8 1248 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 TADA2BQ86TJ2 420 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 DENND1CQ8IV53 801 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF276Q8N554 614 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 GOLGA5Q8TBA6 731 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 BAHD1Q8TBE0 780 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 DDI1Q8WTU0 396 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 SNX19Q92543 992 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 TAF4BQ92750 862 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PIWIL1Q96J94 861 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 NT5C1AQ9BXI3 368 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 DCLK3Q9C098 648 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CIPCQ9C0C6 399 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 C6orf106Q9H6K1 298 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 CLIC5Q9NZA1 410 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 RASAL2Q9UJF2 1139 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 AGO1Q9UL18 857 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PCDHGB2Q9Y5G2 931 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 PCDHA5Q9Y5H7 936 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 SNX11Q9Y5W9 270 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 ADAMTS9Q9P2N4 1935 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 TNRC6BQ9UPQ9 1833 aaKnown RBP7.75□□□□□ -1.17
CSDE1-206ENST00000483030 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
CSDE1-206ENST00000483030 TNFSF14O43557 240 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CUTAO60888 179 aa7.74□□□□□ -1.17
CSDE1-206ENST00000483030 ZIC2O95409 532 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-206ENST00000483030 CYBBP04839 570 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms