RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PCYT2Q99447 389 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 TSC22D4Q9Y3Q8 395 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 STRNO43815 780 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 STAMBPO95630 424 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 C1QAP02745 245 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 KITP10721 976 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 TSHRP16473 764 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 NAA20P61599 178 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 KRT72Q14CN4 511 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 RAB6CQ53S08 254 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 SH3PXD2AQ5TCZ1 1133 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 TMEM53Q6P2H8 277 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 ZPBP2Q6X784 338 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 PDSS2Q86YH6 399 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 RAB6CQ9H0N0 254 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 SLC7A8Q9UHI5 535 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 VILLO15195 856 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 KRT19P08727 400 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 HOXC6P09630 235 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CD97P48960 835 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 KCNJ11Q14654 390 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 C16orf72Q14CZ0 275 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CES4AQ5XG92 561 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 DARS2Q6PI48 645 aaKnown RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 GSDMBQ8TAX9 411 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 SLC35B4Q969S0 331 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CFAP36Q96G28 342 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 PEBP4Q96S96 227 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-213ENST00000482878 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
CCDC78-213ENST00000482878 CXorf49A8MYA2 514 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 F8W8V4 182 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 PSMD7P51665 324 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ALDH18A1P54886 795 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 BTG3Q14201 252 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 MYOCOSA0A1B0GUC4 107 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 PMLP29590 882 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ROR1Q01973 937 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 LPIN1Q14693 890 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 CTAGE3PQ8IX95 158 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 PPM1NQ8N819 430 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 FAF2Q96CS3 445 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 BRD8Q9H0E9 1235 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TMEM247A6NEH6 219 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 NOP56O00567 594 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 COPEO14579 308 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 OGTO15294 1046 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ACTR3P61158 418 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 FOLH1Q04609 750 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 HIC1Q14526 733 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 GIPC3Q8TF64 312 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 TWNKQ96RR1 684 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 PRPF18Q99633 342 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 MRPL4Q9BYD3 311 aaKnown RBP12.81□□□□□ -0.36
CCDC78-213ENST00000482878 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
CCDC78-213ENST00000482878 WDR81Q562E7 1941 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 FKBP6O75344 327 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 TMED10P49755 219 aaKnown RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 KRT81Q14533 505 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 FAXCQ5TGI0 409 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 SLC26A11Q86WA9 606 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 SDCBP2Q9H190 292 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 RAB6BQ9NRW1 208 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 ADAMTS5Q9UNA0 930 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 PSME4Q14997 1843 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 BRWD3Q6RI45 1802 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 IGKV6D-21A0A0A0MT36 114 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 CYB561D2O14569 222 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 UGT1A9O60656 530 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 TRMUO75648 421 aaKnown RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 IL1BP01584 269 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 PGK2P07205 417 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 PCSK6P29122 969 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 CDH6P55285 790 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 BST1Q10588 318 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms