RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 BCAR3O75815 825 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 TOP3BO95985 862 aaKnown RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 SFPQP23246 707 aaKnown RBP eCLIP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 SERPINB3P29508 390 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 PIK3CBP42338 1070 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 CARSP49589 748 aaKnown RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 PRIM2P49643 509 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 GHRHRQ02643 423 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 KCNB1Q14721 858 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 LARS2Q15031 903 aaKnown RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 NPY5RQ15761 445 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 ST3GAL2Q16842 350 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF750Q32MQ0 723 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 XRRA1Q6P2D8 792 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 MZT2AQ6P582 158 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 VSTM1Q6UX27 236 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 DCDC5Q6ZRR9 648 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 C16orf71Q8IYS4 520 aaPredicted RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 CCDC33Q8N5R6 958 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 OR2C3Q8N628 320 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 MAFAQ8NHW3 353 aaPredicted RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 VPS50Q96JG6 964 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 ZC3H10Q96K80 434 aaKnown RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 SGCZQ96LD1 299 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 RIPOR3Q96MK2 946 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 CERS4Q9HA82 394 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 TRNAU1APQ9NX07 287 aaKnown RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 ELOVL5Q9NYP7 299 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 COL20A1Q9P218 1284 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 PI4KBQ9UBF8 816 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 NKX1-2Q9UD57 310 aaPredicted RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 MAFFQ9ULX9 164 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 PTPRKQ15262 1439 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 MLH3Q9UHC1 1453 aa4.36□□□□□ -1.71
GTF3A-207ENST00000482655 CEP170BQ9Y4F5 1589 aaPredicted RBP4.36□□□□□ -1.71
GTF3A-207ENST00000482655 DNMT1P26358 1616 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 MROH2AA6NES4 1674 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 XIRP1Q702N8 1843 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 E5RJQ4 531 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 IL18RAPO95256 599 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 A1BGP04217 495 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 PARP1P09874 1014 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 APEHP13798 732 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 TNFSF4P23510 183 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 ATP5F1P24539 256 aaPredicted RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 STT3AP46977 705 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 CCT4P50991 539 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 RABEP1Q15276 862 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 PDCD2Q16342 344 aaPredicted RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 Q4G0T1 1027 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 ANO1Q5XXA6 986 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 UNC13DQ70J99 1090 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 SESTD1Q86VW0 696 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 NANOGP1Q8N7R0 232 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
GTF3A-207ENST00000482655 CTHRC1Q96CG8 243 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 CHST8Q9H2A9 424 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 PPCSQ9HAB8 311 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 STEAP1Q9UHE8 339 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 RIMKLBQ9ULI2 386 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 CEP83Q9Y592 693 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 NPATQ14207 1427 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 MYO5CQ9NQX4 1742 aa4.35□□□□□ -1.71
GTF3A-207ENST00000482655 KAT6AQ92794 2004 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 POM121BA6NF01 834 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 A8MVJ9 347 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 IL1R1P14778 569 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 TRAPPC10P48553 1259 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 CASP5P51878 434 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 TXNL4AP83876 142 aaKnown RBP4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF543Q08ER8 600 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 DAG1Q14118 895 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 AWAT1Q58HT5 328 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 DGKKQ5KSL6 1271 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 FAM83BQ5T0W9 1011 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 IZUMO3Q5VZ72 239 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ANO7Q6IWH7 933 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 SDR16C5Q8N3Y7 309 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 C11orf44Q8N8P7 122 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 PIGOQ8TEQ8 1089 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 PPM1EQ8WY54 764 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 TRIM63Q969Q1 353 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 HMCESQ96FZ2 354 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 MSLNLQ96KJ4 702 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF48Q96MX3 618 aaPredicted RBP4.34□□□□□ -1.71
GTF3A-207ENST00000482655 SPRTNQ9H040 489 aaPredicted RBP4.34□□□□□ -1.71
GTF3A-207ENST00000482655 PTPRHQ9HD43 1115 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF518AQ6AHZ1 1483 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 SHANK2Q9UPX8 1470 aa4.34□□□□□ -1.71
GTF3A-207ENST00000482655 ABCC1P33527 1531 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms