RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 RASSF3Q86WH2 238 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 CPXM2Q8N436 756 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 NETO1Q8TDF5 533 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 DUSP15Q9H1R2 295 aaPredicted RBP16.01■□□□□ 0.15
CDK9-203ENST00000480353 STARD13Q9Y3M8 1113 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 ZNF292O60281 2723 aa16.01■□□□□ 0.15
CDK9-203ENST00000480353 GTPBP10A4D1E9 387 aaKnown RBP16■□□□□ 0.15
CDK9-203ENST00000480353 MSI1O43347 362 aaKnown RBP16■□□□□ 0.15
CDK9-203ENST00000480353 TSPAN3O60637 253 aa16■□□□□ 0.15
CDK9-203ENST00000480353 TPM2P07951 284 aa16■□□□□ 0.15
CDK9-203ENST00000480353 ERCC5P28715 1186 aaPredicted RBP16■□□□□ 0.15
CDK9-203ENST00000480353 MPLP40238 635 aa16■□□□□ 0.15
CDK9-203ENST00000480353 SLC11A2P49281 568 aa16■□□□□ 0.15
CDK9-203ENST00000480353 DHPSP49366 369 aaPredicted RBP16■□□□□ 0.15
CDK9-203ENST00000480353 ZNF132P52740 706 aa16■□□□□ 0.15
CDK9-203ENST00000480353 TRIP4Q15650 581 aaPredicted RBP16■□□□□ 0.15
CDK9-203ENST00000480353 DPCR1Q3MIW9 517 aa16■□□□□ 0.15
CDK9-203ENST00000480353 HSP90AA4PQ58FG1 418 aa16■□□□□ 0.15
CDK9-203ENST00000480353 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
CDK9-203ENST00000480353 LPCAT2Q7L5N7 544 aa16■□□□□ 0.15
CDK9-203ENST00000480353 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
CDK9-203ENST00000480353 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
CDK9-203ENST00000480353 CLEC4CQ8WTT0 213 aa16■□□□□ 0.15
CDK9-203ENST00000480353 DDX50Q9BQ39 737 aaKnown RBP16■□□□□ 0.15
CDK9-203ENST00000480353 RTKNQ9BST9 563 aa16■□□□□ 0.15
CDK9-203ENST00000480353 CIPCQ9C0C6 399 aa16■□□□□ 0.15
CDK9-203ENST00000480353 PDCL3Q9H2J4 239 aa16■□□□□ 0.15
CDK9-203ENST00000480353 CEP83Q9Y592 693 aa16■□□□□ 0.15
CDK9-203ENST00000480353 SPTBN4Q9H254 2564 aa16■□□□□ 0.15
CDK9-203ENST00000480353 GPR179Q6PRD1 2367 aa16■□□□□ 0.15
CDK9-203ENST00000480353 FRYLO94915 3013 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 ADAM23O75077 832 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 LATS1O95835 1130 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 PENKP01210 267 aaPredicted RBP15.99■□□□□ 0.15
CDK9-203ENST00000480353 TBX4P57082 545 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 SNX16P57768 344 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 PTK2Q05397 1052 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 FYB2Q5VWT5 728 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 IL31Q6EBC2 164 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 DENND1BQ6P3S1 775 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 GJB7Q6PEY0 223 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 SCUBE3Q8IX30 993 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 ZNF606Q8WXB4 792 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 RLN3Q8WXF3 142 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 ERLEC1Q96DZ1 483 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 TMA16Q96EY4 203 aaKnown RBP15.99■□□□□ 0.15
CDK9-203ENST00000480353 NOX5Q96PH1 765 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 MED15Q96RN5 788 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 ZSWIM1Q9BR11 485 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 TUBGCP2Q9BSJ2 902 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 VPS45Q9NRW7 570 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 NUP205Q92621 2012 aa15.99■□□□□ 0.15
CDK9-203ENST00000480353 PRRT4C9JH25 899 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 NPC1O15118 1278 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 SYNCRIPO60506 623 aaKnown RBP15.98■□□□□ 0.15
CDK9-203ENST00000480353 CAVIN2O95810 425 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 CISD3P0C7P0 127 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK9-203ENST00000480353 KCNA4P22459 653 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 TGM1P22735 817 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 KRT9P35527 623 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 GPD2P43304 727 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 ATXN1P54253 815 aaKnown RBP15.98■□□□□ 0.15
CDK9-203ENST00000480353 SF3A2Q15428 464 aaKnown RBP15.98■□□□□ 0.15
CDK9-203ENST00000480353 MEA1Q16626 185 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 ADGRF1Q5T601 910 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 PMS2CLQ68D20 193 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 MSANTD2Q6P1R3 559 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 SERPINB11Q96P15 392 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 SLC2A11Q9BYW1 496 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 NDST4Q9H3R1 872 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 CACNA2D2Q9NY47 1150 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 DLL3Q9NYJ7 618 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 SLC27A6Q9Y2P4 619 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 CEP192Q8TEP8 1941 aa15.98■□□□□ 0.15
CDK9-203ENST00000480353 ABCA7Q8IZY2 2146 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 KCNJ18B7U540 433 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 GFRA2O00451 464 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 AP5Z1O43299 807 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 ZNF217O75362 1048 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 PON1P27169 355 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 P2RY2P41231 377 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 RAPGEF1Q13905 1077 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 CT47A1Q5JQC4 288 aaPredicted RBP15.97■□□□□ 0.15
CDK9-203ENST00000480353 KIAA1324Q6UXG2 1013 aaKnown RBP15.97■□□□□ 0.15
CDK9-203ENST00000480353 SLC36A4Q6YBV0 504 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 ARMCX6Q7L4S7 300 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 IPO4Q8TEX9 1081 aaKnown RBP15.97■□□□□ 0.15
CDK9-203ENST00000480353 STK32AQ8WU08 396 aa15.97■□□□□ 0.15
CDK9-203ENST00000480353 ACOX2Q99424 681 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms