RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 I6L893 689 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC2A3P11169 496 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 CCR1P32246 355 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 COPS2P61201 443 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 COG7P83436 770 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 EFEMP1Q12805 493 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 NME3Q13232 169 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC5A9Q2M3M2 681 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 ERMARDQ5T6L9 678 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 ACBD5Q5T8D3 534 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 RASGEF1CQ8N431 466 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 CCDC185Q8N715 623 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 HAPLN3Q96S86 360 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 SNRNP25Q9BV90 132 aaKnown RBP17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 KLF16Q9BXK1 252 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 RNF38Q9H0F5 515 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 S1PR5Q9H228 398 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 ATXN3LQ9H3M9 355 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 IGFLR1Q9H665 355 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 PCSK1NQ9UHG2 260 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 NUDT5Q9UKK9 219 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 C3orf70A6NLC5 250 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 MSI1O43347 362 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 MYL4P12829 197 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TCF3P15923 654 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ZNF135P52742 658 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TBX4P57082 545 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 CYP4F8P98187 520 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 NRG1Q02297 640 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ITIH3Q06033 890 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 SEMA3BQ13214 749 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ARL13BQ3SXY8 428 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TMC5Q6UXY8 1006 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 RCOR2Q8IZ40 523 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 C12orf76Q8N812 135 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TSC1Q92574 1164 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 PLD4Q96BZ4 506 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 PABPC5Q96DU9 382 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 RBM41Q96IZ5 413 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 MSLNLQ96KJ4 702 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 OSBPL2Q9H1P3 480 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 TASP1Q9H6P5 420 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 ANLNQ9NQW6 1124 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 RNF14Q9UBS8 474 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 RASAL2Q9UJF2 1139 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 EFR3BQ9Y2G0 817 aa17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 PRRC2BQ5JSZ5 2229 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-207ENST00000480219 REV3LO60673 3130 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 C2orf16Q68DN1 1984 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 MYO9BQ13459 2157 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 KCNK3O14649 394 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 TBX10O75333 385 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 ZRANB2O95218 330 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 LATS1O95835 1130 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 PYGMP11217 842 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 LTBRP36941 435 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 NTHL1P78549 312 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 PDK2Q15119 407 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 PPP2R5EQ16537 467 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 ZC3H12AQ5D1E8 599 aaKnown RBP17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 ARTNQ5T4W7 220 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 NUGGCQ68CJ6 796 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 TXNDC8Q6A555 127 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 SCYL2Q6P3W7 929 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 FAF2Q96CS3 445 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC22A12Q96S37 553 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC46A2Q9BY10 475 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 TKTL2Q9H0I9 626 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 RCOR3Q9P2K3 495 aaPredicted RBP17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 CDC23Q9UJX2 597 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 ARHGAP26Q9UNA1 814 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
SCAMP3-207ENST00000480219 TRAV19A0A0A6YYK7 116 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC12A8A0AV02 714 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 GREM1O60565 184 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 HDCP19113 662 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 KDELR1P24390 212 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 L1CAMP32004 1257 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 HTR7P34969 479 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 SSR1P43307 286 aaKnown RBP17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 TEAD2Q15562 447 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 ARHGAP15Q53QZ3 475 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 KCNT1Q5JUK3 1230 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 RARS2Q5T160 578 aaKnown RBP17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 MIB1Q86YT6 1006 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 CREG2Q8IUH2 290 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 UNC45BQ8IWX7 931 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 ACTRT1Q8TDG2 376 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 ADAMTS19Q8TE59 1207 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 COG1Q8WTW3 980 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms