RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 MIB1Q86YT6 1006 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ZNF276Q8N554 614 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 DEFB123Q8N688 67 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 RNF139Q8WU17 664 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SLC39A13Q96H72 371 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 HES6Q96HZ4 224 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ALS2CR12Q96Q35 445 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 PSMB7Q99436 277 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 HERPUD2Q9BSE4 406 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SNRNP25Q9BV90 132 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 TRIM62Q9BVG3 475 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SLC46A2Q9BY10 475 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ZWILCHQ9H900 591 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 GKN1Q9NS71 199 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SMPD4Q9NXE4 827 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 RRN3Q9NYV6 651 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 MARCH2Q9P0N8 246 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 DPP7Q9UHL4 492 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 DNAI1Q9UI46 699 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SNX10Q9Y5X0 201 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 KIAA1549LQ6ZVL6 1849 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SLC12A8A0AV02 714 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PI4K2BG5E9Z4 385 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 H3BQ06 376 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SCAMP3O14828 347 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 GREM1O60565 184 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 HMBSP08397 361 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 CD48P09326 243 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SRGAP2BP0DMP2 458 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 IRF1P10914 325 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 MBL2P11226 248 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 FOSL2P15408 326 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PCK1P35558 622 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 ATP5C1P36542 298 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SLC1A1P43005 524 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PPP3CCP48454 512 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 CXCR3P49682 368 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PEX5P50542 639 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 AMPD2Q01433 879 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 NNTQ13423 1086 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 CBX2Q14781 532 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 AADACL2Q6P093 401 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SCYL2Q6P3W7 929 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 EP400NLQ6ZTU2 488 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 GET4Q7L5D6 327 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PYROXD2Q8N2H3 581 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 MAB21L3Q8N8X9 362 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SMRP1Q8NCR6 262 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 MRPS31Q92665 395 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 MYEOVQ96EZ4 313 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 CALR3Q96L12 384 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SERPINB11Q96P15 392 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 GCNAQ96QF7 691 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 ADAM7Q9H2U9 754 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 POMKQ9H5K3 350 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 OLA1Q9NTK5 396 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 USP18Q9UMW8 372 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 NEU3Q9UQ49 428 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 CPQQ9Y646 472 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 TICRRQ7Z2Z1 1910 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 SHROOM3Q8TF72 1996 aa9.32□□□□□ -0.92
NUDCD3-208ENST00000480209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 C3orf70A6NLC5 250 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 KCNU1A8MYU2 1149 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 FAM72CH0Y354 149 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 PSTPIP1O43586 416 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 STC2O76061 302 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 RNF8O76064 485 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 FGF19O95750 216 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 MOCS2O96007 188 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 KLKB1P03952 638 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 KRT1P04264 644 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 CKMP06732 381 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 RARAP10276 462 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 HOXB8P17481 243 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 FSHRP23945 695 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 CXCR5P32302 372 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 SSR1P43307 286 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 ARSEP51690 589 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 TBX4P57082 545 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 USP4Q13107 963 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 ZNF211Q13398 564 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 PPP2R5DQ14738 602 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 ACAP1Q15027 740 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 FAM72AQ5TYM5 149 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 PIK3R6Q5UE93 754 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 LRRC38Q5VT99 294 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 NADSYN1Q6IA69 706 aa9.31□□□□□ -0.92
NUDCD3-208ENST00000480209 FAM72DQ6L9T8 149 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms