RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HACE1Q8IYU2 909 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 CFAP36Q96G28 342 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 SLC2A13Q96QE2 648 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 LGMNQ99538 433 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 ULBP1Q9BZM6 244 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 PLAC1Q9HBJ0 212 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 SPC25Q9HBM1 224 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 GIT1Q9Y2X7 761 aa13.47□□□□□ -0.25
SEC13-216ENST00000479868 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 E7ENQ6 273 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 I3L4J1 428 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 CA12O43570 354 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 MFSD11O43934 449 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 CAPN15O75808 1086 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 THPOP40225 353 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 CAP1Q01518 475 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 CBLBQ13191 982 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 UPP1Q16831 310 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 FBXW10Q5XX13 1052 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 HEATR6Q6AI08 1181 aaKnown RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 FAM47EQ6ZV65 393 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 VPS52Q8N1B4 723 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 TMEM86AQ8N2M4 240 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 ADAM32Q8TC27 787 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 RNF139Q8WU17 664 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 ABCF3Q9NUQ8 709 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 GGT7Q9UJ14 662 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 GOLGA8RI6L899 631 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 GPR182O15218 404 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 DGKIO75912 1065 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 C1QAP02745 245 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 GHRP10912 638 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 SCTRP47872 440 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 PRKCZQ05513 592 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 SPARCL1Q14515 664 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 KCNA10Q16322 511 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 TRPM8Q7Z2W7 1104 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 SPATA21Q7Z572 469 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 PSTKQ8IV42 348 aaKnown RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 SLC44A1Q8WWI5 657 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 TRIM56Q9BRZ2 755 aaKnown RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 XPNPEP3Q9NQH7 507 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 RCOR3Q9P2K3 495 aaPredicted RBP13.46□□□□□ -0.25
SEC13-216ENST00000479868 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.25
SEC13-216ENST00000479868 TDRD15B5MCY1 1934 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 H0YHG0 523 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 CREB3O43889 395 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 POMCP01189 267 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 AMHP03971 560 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 GRIA1P42261 906 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 DAOAP59103 153 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 DEUP1Q05D60 604 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 PTK7Q13308 1070 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 MTFR1Q15390 333 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 MRPL10Q7Z7H8 261 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 SLC7A14Q8TBB6 771 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 C12orf65Q9H3J6 166 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 ANLNQ9NQW6 1124 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 SPAG6O75602 509 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 TOMM70O94826 608 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 SUN1O94901 812 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 MAGEA3P43357 314 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 TM4SF4P48230 202 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 TTC31Q49AM3 519 aaPredicted RBP13.45□□□□□ -0.26
SEC13-216ENST00000479868 RAB41Q5JT25 222 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 LVRNQ6Q4G3 990 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 C4orf22Q6V702 233 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 MPP5Q8N3R9 675 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 MCUQ8NE86 351 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 RTP3Q9BQQ7 232 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 PITPNM3Q9BZ71 974 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 CDH9Q9ULB4 789 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 TLL2Q9Y6L7 1015 aa13.45□□□□□ -0.26
SEC13-216ENST00000479868 CXorf49A8MYA2 514 aaPredicted RBP13.44□□□□□ -0.26
SEC13-216ENST00000479868 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms